RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 SPATA31C2B4DYI2 1134 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 MEIS1O00470 390 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 DUSP11O75319 330 aaKnown RBP14.19□□□□□ -0.14
USP40-205ENST00000430158 STAM2O75886 525 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 XBP1P17861 261 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 SP2Q02086 613 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 NR5A1Q13285 461 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 GJC2Q5T442 439 aaPredicted RBP14.19□□□□□ -0.14
USP40-205ENST00000430158 UBE2Q1Q7Z7E8 422 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
USP40-205ENST00000430158 WDR11Q9BZH6 1224 aa14.19□□□□□ -0.14
USP40-205ENST00000430158 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
USP40-205ENST00000430158 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
USP40-205ENST00000430158 FAM86B1E9PN63 330 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 MSCO60682 206 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 ADAMTS4O75173 837 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 FAM86B2P0C5J1 330 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 CNGA1P29973 690 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 FOSBP53539 338 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 GJA9P57773 515 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
USP40-205ENST00000430158 GUCY1B3Q02153 619 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 TNFAIP2Q03169 654 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 ANO1Q5XXA6 986 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 CCSAPQ6IQ19 270 aaPredicted RBP14.18□□□□□ -0.14
USP40-205ENST00000430158 SEPT14Q6ZU15 432 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 DIS3L2Q8IYB7 885 aaKnown RBP14.18□□□□□ -0.14
USP40-205ENST00000430158 KLHDC9Q8NEP7 349 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 COPS5Q92905 334 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 LENG9Q96B70 501 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 MBOAT7Q96N66 472 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 BCAS3Q9H6U6 928 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 JADE2Q9NQC1 790 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 RTEL1Q9NZ71 1219 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 Q9Y3F1 56 aa14.18□□□□□ -0.14
USP40-205ENST00000430158 CEP290O15078 2479 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 CYP3A7-CYP3A51PA0A087WV96 503 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 KIF28PB7ZC32 967 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 TGFB3P10600 412 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 EN2P19622 333 aaPredicted RBP14.17□□□□□ -0.14
USP40-205ENST00000430158 CYP3A7P24462 503 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 U2AF2P26368 475 aaKnown RBP eCLIP14.17□□□□□ -0.146e-8■■■□□ 15.8
USP40-205ENST00000430158 KRT2P35908 639 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 USP11P51784 963 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 CEP55Q53EZ4 464 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 KRT25Q7Z3Z0 450 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 TBCKQ8TEA7 893 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 GPRASP2Q96D09 838 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 EHMT1Q9H9B1 1298 aa14.17□□□□□ -0.14
USP40-205ENST00000430158 SYNRGQ9UMZ2 1314 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 CCDC85CA6NKD9 419 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 ATP9AO75110 1047 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 PGK1P00558 417 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 TXNP10599 105 aaKnown RBP14.16□□□□□ -0.14
USP40-205ENST00000430158 RARBP10826 455 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 CAPN2P17655 700 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 CST5P28325 142 aaPredicted RBP14.16□□□□□ -0.14
USP40-205ENST00000430158 ARHGAP1Q07960 439 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 NONOQ15233 471 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP40-205ENST00000430158 LRRC41Q15345 812 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 INF2Q27J81 1249 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
USP40-205ENST00000430158 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
USP40-205ENST00000430158 DNAH12Q6ZR08 3092 aa14.16□□□□□ -0.14
USP40-205ENST00000430158 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 WNT7AO00755 349 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 NKRFO15226 690 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP40-205ENST00000430158 FIBPO43427 364 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 ARP10275 920 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 COL6A1P12109 1028 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 KCNA2P16389 499 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 UBA1P22314 1058 aaKnown RBP14.15□□□□□ -0.14
USP40-205ENST00000430158 TRIM29Q14134 588 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 MYSM1Q5VVJ2 828 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 KCNV1Q6PIU1 500 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 SENP7Q9BQF6 1050 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 XPNPEP3Q9NQH7 507 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 KCNH7Q9NS40 1196 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
USP40-205ENST00000430158 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 A6NJR5 290 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 MAFGO15525 162 aa14.14□□□□□ -0.15
USP40-205ENST00000430158 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
USP40-205ENST00000430158 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms