RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CLMNQ96JQ2 1002 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 ANKRD27Q96NW4 1050 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 SPATA16Q9BXB7 569 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 LRRCC1Q9C099 1032 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 EXOC1Q9NV70 894 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 CTNNAL1Q9UBT7 734 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 CHMP2BQ9UQN3 213 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 CASZ1Q86V15 1759 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 CBFA2T2O43439 604 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 ADAM23O75077 832 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 TUBBP07437 444 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 COL6A1P12109 1028 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 GM2AP17900 193 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 KRT9P35527 623 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 MATR3P43243 847 aaKnown RBP eCLIP4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 FOSBP53539 338 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 MAP7D1Q3KQU3 841 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 PARP10Q53GL7 1025 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 RAD9BQ6WBX8 426 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 KRT27Q7Z3Y8 459 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 SREK1Q8WXA9 508 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 IRGQQ8WZA9 623 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 NLRP3Q96P20 1036 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 SMC6Q96SB8 1091 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 OSBPL3Q9H4L5 887 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 ZNHIT6Q9NWK9 470 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 RMND1Q9NWS8 449 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 HYPKQ9NX55 129 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 DLGAP2Q9P1A6 1054 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 ATP6V1DQ9Y5K8 247 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 MYH6P13533 1939 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 KIAA0232Q92628 1395 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 NWD2Q9ULI1 1742 aa4.8□□□□□ -1.64
R3HDM1-206ENST00000429703 VPS37CA5D8V6 355 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TTI1O43156 1089 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 PFDN1O60925 122 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 KRT16P08779 473 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 RARAP10276 462 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ATP2A2P16615 1042 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 RXRGP48443 463 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TUFMP49411 452 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 COL19A1Q14993 1142 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 PPP1R7Q15435 360 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 GJC2Q5T442 439 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 C6orf183Q5T699 404 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 VASH1Q7L8A9 365 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 PPFIBP1Q86W92 1011 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ANKLE2Q86XL3 938 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TREML1Q86YW5 311 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 GRAMD2AQ8IUY3 354 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 CCDC83Q8IWF9 413 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 DCLK2Q8N568 766 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 USHBP1Q8N6Y0 703 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 RIN3Q8TB24 985 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ATP8B4Q8TF62 1192 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 GATA6Q92908 595 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 LENG1Q96BZ8 264 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 GJD4Q96KN9 370 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ZIM3Q96PE6 472 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 MMS19Q96T76 1030 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 KIAA1468Q9P260 1216 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 COLQQ9Y215 455 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TMEM94Q12767 1356 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TOPAZ1Q8N9V7 1692 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 QRICH2Q9H0J4 1663 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 LAMA4Q16363 1823 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 MST1RQ04912 1400 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 JCADQ9P266 1359 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 A6NNZ2 444 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 SLC26A4O43511 780 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 GIGYF1O75420 1035 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 FLOT1O75955 427 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TOP1P11387 765 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ACADSP16219 412 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 COPB2P35606 906 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 SLC16A2P36021 539 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TXKP42681 527 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 MCCD1P59942 119 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 NCALDP61601 193 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TUBB4BP68371 445 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 KRT85P78386 507 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 E2F2Q14209 437 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TUBB8Q3ZCM7 444 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TRIM68Q6AZZ1 485 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TMEM214Q6NUQ4 689 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ASRGL1Q7L266 308 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TRAPPC11Q7Z392 1133 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 RSPH3Q86UC2 560 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 C11orf74Q86VG3 221 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 ARHGEF25Q86VW2 580 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 FAM20CQ8IXL6 584 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 SLC35F6Q8N357 371 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 TTC39CQ8N584 583 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 CABLES1Q8TDN4 633 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 UTP4Q969X6 686 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 RUNDC1Q96C34 613 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 FBXL18Q96ME1 805 aa4.79□□□□□ -1.64
R3HDM1-206ENST00000429703 CCDC85AQ96PX6 553 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms