RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 RIC8AQ9NPQ8 531 aa13.25□□□□□ -0.29
PABPC1P11-201ENST00000428966 FRMPD4Q14CM0 1322 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 B4DLN1 442 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 DNM1LO00429 736 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 ARIH2O95376 493 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 COL6A1P12109 1028 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 CAPN2P17655 700 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 MRPL12P52815 198 aaKnown RBP13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 IQSEC1Q6DN90 963 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 TRIM22Q8IYM9 498 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 WDR11Q9BZH6 1224 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
PABPC1P11-201ENST00000428966 CTAGE5O15320 804 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 F13A1P00488 732 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 SYT1P21579 422 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 MRPS9P82933 396 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 DUSP28Q4G0W2 176 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 SEPT14Q6ZU15 432 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 PTMAP06454 111 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 ADCY7P51828 1080 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 SCFD2Q8WU76 684 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
PABPC1P11-201ENST00000428966 FRMPD3Q5JV73 1810 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 DEXIO95424 95 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 GJA9P57773 515 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 CCDC62Q6P9F0 684 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 RNF180Q86T96 592 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 KLHDC9Q8NEP7 349 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 COPS5Q92905 334 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 UPF3AQ9H1J1 476 aaKnown RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 KBTBD13C9JR72 458 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 CDKL5O76039 1030 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 FDPSP14324 419 aaKnown RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 CCND2P30279 289 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 LY6KQ17RY6 165 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 SENP6Q9GZR1 1112 aaPredicted RBP13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
PABPC1P11-201ENST00000428966 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 NKX3-2P78367 333 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 BEX3Q00994 111 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 KCNA10Q16322 511 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 FOXD4L6Q3SYB3 417 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 FOXD4L3Q6VB84 417 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 FERMT2Q96AC1 680 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
PABPC1P11-201ENST00000428966 STK36Q9NRP7 1315 aa13.21□□□□□ -0.3
PABPC1P11-201ENST00000428966 JAK2O60674 1132 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 GJB2P29033 226 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 NPY5RQ15761 445 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 Q9Y3F1 56 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 LAMA3Q16787 3333 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 ASGR1P07306 291 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 PDCP20941 246 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 ACLYP53396 1101 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 SP2Q02086 613 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 FSCN1Q16658 493 aaKnown RBP13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 REXO1Q8N1G1 1221 aaKnown RBP13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
PABPC1P11-201ENST00000428966 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms