RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 MTMR4Q9NYA4 1195 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 MUTYHQ9UIF7 546 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ADAMTS5Q9UNA0 930 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ZDHHC9Q9Y397 364 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 F5H6K3 240 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 ZMYND10O75800 440 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 KRT37O76014 449 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 NDUFB10O96000 172 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 IRS1P35568 1242 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 PDE4BQ07343 736 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 KLRC3Q07444 240 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 ACVR2BQ13705 512 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 BMP8AQ7Z5Y6 402 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 RIOX2Q8IUF8 465 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 ADHFE1Q8IWW8 467 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 ZNF444Q8N0Y2 327 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-202ENST00000428704 LRRC47Q8N1G4 583 aaKnown RBP10.06□□□□□ -0.8
HDAC1-202ENST00000428704 REPS2Q8NFH8 660 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 MKL1Q969V6 931 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 PBXIP1Q96AQ6 731 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 FTOQ9C0B1 505 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC1-202ENST00000428704 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 ZNF287Q9HBT7 754 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 BRWD1Q9NSI6 2320 aa10.06□□□□□ -0.8
HDAC1-202ENST00000428704 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 LCHNA4D1U4 455 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 ADCY6O43306 1168 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 ORC4O43929 436 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 NMT2O60551 498 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 CASTP20810 708 aaKnown RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 COPB2P35606 906 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 KCNJ6P48051 423 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 NOVP48745 357 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 TFAP4Q01664 338 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 KLHL40Q2TBA0 621 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 CCDC144BQ3MJ40 725 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 HERC4Q5GLZ8 1057 aaPredicted RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 L1TD1Q5T7N2 865 aaKnown RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 RASGRP2Q7LDG7 609 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 EDAQ92838 391 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 DDX11Q96FC9 970 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 JAKMIP1Q96N16 626 aaKnown RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 ZNF214Q9UL59 606 aaPredicted RBP10.05□□□□□ -0.8
HDAC1-202ENST00000428704 PPP1R9AQ9ULJ8 1098 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 SMCHD1A6NHR9 2005 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 LCTP09848 1927 aa10.05□□□□□ -0.8
HDAC1-202ENST00000428704 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
HDAC1-202ENST00000428704 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 TMEM221A6NGB7 291 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 M0R296 226 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 VWA5AO00534 786 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 TTLL1O95922 423 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
HDAC1-202ENST00000428704 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
HDAC1-202ENST00000428704 STAT3P40763 770 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 HAND2P61296 217 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 BLOC1S2Q6QNY1 142 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 MAMDC4Q6UXC1 1216 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 TGS1Q96RS0 853 aaKnown RBP10.04□□□□□ -0.8
HDAC1-202ENST00000428704 POP1Q99575 1024 aaKnown RBP10.04□□□□□ -0.8
HDAC1-202ENST00000428704 ABHD16BQ9H3Z7 469 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 NEDD4P46934 1319 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 CACNA1BQ00975 2339 aa10.04□□□□□ -0.8
HDAC1-202ENST00000428704 TSPY2A6NKD2 308 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 CTAGE5O15320 804 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 RAD21O60216 631 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 ZEB2O60315 1214 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 SUPT20HL2P0C7V6 817 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 CYP2C9P11712 490 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 RPS6KB1P23443 525 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 RFC2P35250 354 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 PSMC6P62333 389 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 PKP1Q13835 747 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 SPNS2Q8IVW8 549 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 FBXL16Q8N461 479 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms