RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 DDX39AO00148 427 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 IPO5O00410 1097 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 MSH4O15457 936 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 PRPF40AO75400 957 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 ARP10275 920 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 PRPHP41219 470 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 CAP1Q01518 475 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 CCL14Q16627 93 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 LRCH2Q5VUJ6 765 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 ARL6IP4Q66PJ3 421 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 OLFML2BQ68BL8 750 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 DTHD1Q6ZMT9 781 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 SLFN12Q8IYM2 578 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 MSL3Q8N5Y2 521 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 TMEM87AQ8NBN3 555 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 ETNPPLQ8TBG4 499 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 RAET1EQ8TD07 263 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 MORC4Q8TE76 937 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 SCFD2Q8WU76 684 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 GJA10Q969M2 543 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 CDHR1Q96JP9 859 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 FAM20AQ96MK3 541 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 SDF4Q9BRK5 362 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 TEKT3Q9BXF9 490 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 RAB34Q9BZG1 259 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 AGO4Q9HCK5 861 aaKnown RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 VTA1Q9NP79 307 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 KCNMB3Q9NPA1 279 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 KCNH7Q9NS40 1196 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 SRRDQ9UH36 339 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 FBXO2Q9UK22 296 aaPredicted RBP8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 GJD2Q9UKL4 321 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 GABRQQ9UN88 632 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 ELP1O95163 1332 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 PLXNB2O15031 1838 aa8.94□□□□□ -0.98
HMGA1P4-201ENST00000428643 TBX3O15119 743 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 CHMP2AO43633 222 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 SORBS3O60504 671 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 CUTAO60888 179 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 PPP6R2O75170 966 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 RGS20O76081 388 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 GNRH1P01148 92 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 XRCC5P13010 732 aaKnown RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 CYP2C19P33261 490 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 MCM4P33991 863 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 MAMDC4Q6UXC1 1216 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 TRMT44Q8IYL2 757 aaKnown RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 RASSF8Q8NHQ8 419 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 TRIB2Q92519 343 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 HAS1Q92839 578 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 SLC5A5Q92911 643 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 MTMR9Q96QG7 549 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 CSRNP2Q9H175 543 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 TTC12Q9H892 705 aaPredicted RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 FLRT1Q9NZU1 646 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 PCDHA7Q9UN72 937 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 SRPRBQ9Y5M8 271 aaKnown RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 MORC2Q9Y6X9 1032 aaPredicted RBP8.93□□□□□ -0.98
HMGA1P4-201ENST00000428643 POTEMA6NI47 508 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 SPATA31C2B4DYI2 1134 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 SNAI1O95863 264 aaPredicted RBP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 HSPA1AP0DMV8 641 aaKnown RBP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 HSPA1BP0DMV9 641 aaKnown RBP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 ELNP15502 786 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 TXLNAP40222 546 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 TECP42680 631 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 PRMT2P55345 433 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 UBE2HP62256 183 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 SP4Q02446 784 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 GRIN1Q05586 938 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 SEMA3FQ13275 785 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 ITGB3BPQ13352 177 aaPredicted RBP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 IRF5Q13568 498 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 ACVR2BQ13705 512 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 TTLL4Q14679 1199 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 IL17AQ16552 155 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 NCAPH2Q6IBW4 605 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 CCDC73Q6ZRK6 1079 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 CLIC6Q96NY7 704 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 RIT2Q99578 217 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 ABHD16BQ9H3Z7 469 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 JPH1Q9HDC5 661 aaPredicted RBP8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 PDGFCQ9NRA1 345 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 TBC1D22BQ9NU19 505 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 VAV3Q9UKW4 847 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 PCDHA12Q9UN75 941 aa8.92□□□□□ -0.98
HMGA1P4-201ENST00000428643 ZSWIM8A7E2V4 1837 aa8.91□□□□□ -0.98
HMGA1P4-201ENST00000428643 A0A1W2PQ27 194 aa8.91□□□□□ -0.98
HMGA1P4-201ENST00000428643 A0A1W2PQ64 194 aa8.91□□□□□ -0.98
HMGA1P4-201ENST00000428643 A0A1W2PQD8 194 aa8.91□□□□□ -0.98
HMGA1P4-201ENST00000428643 PP2D1A8MPX8 630 aa8.91□□□□□ -0.98
HMGA1P4-201ENST00000428643 FOXN1O15353 648 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms