RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 KIAA0753Q2KHM9 967 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 PPP1R13LQ8WUF5 828 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 DHX38Q92620 1227 aaKnown RBP20.18■□□□□ 0.82
DDR1-235ENST00000428153 MAP3K14Q99558 947 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 MTA3Q9BTC8 594 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 MYH7BA7E2Y1 1941 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 PRRC2BQ5JSZ5 2229 aaKnown RBP20.17■□□□□ 0.82
DDR1-235ENST00000428153 ABHD14A-ACY1A0A1B0GW23 586 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 GPNMBQ14956 572 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 SLC35G1Q2M3R5 365 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 SPATA33Q96N06 139 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 FRMPD4Q14CM0 1322 aa20.17■□□□□ 0.82
DDR1-235ENST00000428153 E7EWF7 191 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 SGSM2O43147 1006 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 CYTH3O43739 400 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 MYCLP12524 364 aaPredicted RBP20.16■□□□□ 0.82
DDR1-235ENST00000428153 WDR5P61964 334 aaKnown RBP20.16■□□□□ 0.82
DDR1-235ENST00000428153 PTH1RQ03431 593 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 TAP1Q03518 808 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 CCDC85BQ15834 202 aaPredicted RBP20.16■□□□□ 0.82
DDR1-235ENST00000428153 AAK1Q2M2I8 961 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 HSDL1Q3SXM5 330 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 GNPTABQ3T906 1256 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 HOMER1Q86YM7 354 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 PIGSQ96S52 555 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 MTCH2Q9Y6C9 303 aa20.16■□□□□ 0.82
DDR1-235ENST00000428153 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
DDR1-235ENST00000428153 TLL1O43897 1013 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 GGPS1O95749 300 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 ZNF286BP0CG31 522 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 UBA1P22314 1058 aaKnown RBP20.15■□□□□ 0.82
DDR1-235ENST00000428153 SMARCA1P28370 1054 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
DDR1-235ENST00000428153 TRIM71Q2Q1W2 868 aaKnown RBP20.15■□□□□ 0.82
DDR1-235ENST00000428153 MAP4K1Q92918 833 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 ALG1Q9BT22 464 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 EMSYQ7Z589 1322 aa20.15■□□□□ 0.82
DDR1-235ENST00000428153 NBNO60934 754 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 HOXC8P31273 242 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 ICAM3P32942 547 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 SP2Q02086 613 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 IL27Q8NEV9 243 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 IL31RAQ8NI17 732 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 IGDCC4Q8TDY8 1250 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 INPP4AQ96PE3 977 aaPredicted RBP20.14■□□□□ 0.81
DDR1-235ENST00000428153 C16orf70Q9BSU1 422 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 MLXIPQ9HAP2 919 aa20.14■□□□□ 0.81
DDR1-235ENST00000428153 IKBKEQ14164 716 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 NEDD9Q14511 834 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 XRRA1Q6P2D8 792 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 TRAF7Q6Q0C0 670 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 SERINC5Q86VE9 423 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 MB21D2Q8IYB1 491 aaPredicted RBP20.13■□□□□ 0.81
DDR1-235ENST00000428153 ADAMTS19Q8TE59 1207 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 SPZ1Q9BXG8 430 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 LMCD1Q9NZU5 365 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 COG5Q9UP83 839 aa20.13■□□□□ 0.81
DDR1-235ENST00000428153 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
DDR1-235ENST00000428153 PTPRSQ13332 1948 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 CAND2O75155 1236 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 DDAH1O94760 285 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 GJB5O95377 273 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 KIF5BP33176 963 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 METTL7BQ6UX53 244 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 TMTC2Q8N394 836 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 UHRF1Q96T88 793 aaPredicted RBP20.12■□□□□ 0.81
DDR1-235ENST00000428153 RAD9AQ99638 391 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 LZTS2Q9BRK4 669 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 SENP2Q9HC62 589 aa20.12■□□□□ 0.81
DDR1-235ENST00000428153 H3BRB1 525 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 PIK3CDO00329 1044 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 FIBPO43427 364 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 ANTXR2P58335 489 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 ZNF618Q5T7W0 954 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 ARNTL2Q8WYA1 636 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 SENP7Q9BQF6 1050 aa20.11■□□□□ 0.81
DDR1-235ENST00000428153 TUT1Q9H6E5 874 aaKnown RBP20.11■□□□□ 0.81
DDR1-235ENST00000428153 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 EPOPA6NHQ4 379 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 SPATA31C2B4DYI2 1134 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 LGR5O75473 907 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 ARHGEF15O94989 841 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 GNAQP50148 359 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
DDR1-235ENST00000428153 MICALL1Q8N3F8 863 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 CTCFLQ8NI51 663 aaPredicted RBP20.1■□□□□ 0.81
DDR1-235ENST00000428153 ZBED2Q9BTP6 218 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 TAF6LQ9Y6J9 622 aa20.1■□□□□ 0.81
DDR1-235ENST00000428153 RFXAPO00287 272 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 NOP56O00567 594 aaKnown RBP20.09■□□□□ 0.81
DDR1-235ENST00000428153 LGALS2P05162 132 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 GNAT1P11488 350 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 BMP1P13497 986 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 DEFB103AP81534 67 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms