RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
RTN4-210ENST00000427710 LAMA3Q16787 3333 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 SPDYE3A6NKU9 549 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 SOX1O00570 391 aaPredicted RBP17.06■□□□□ 0.32
RTN4-210ENST00000427710 TLR3O15455 904 aaKnown RBP17.06■□□□□ 0.32
RTN4-210ENST00000427710 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
RTN4-210ENST00000427710 CD4P01730 458 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
RTN4-210ENST00000427710 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 PPP1R18Q6NYC8 613 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
RTN4-210ENST00000427710 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 SZT2Q5T011 3432 aa17.06■□□□□ 0.32
RTN4-210ENST00000427710 MYO9BQ13459 2157 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 EPHB4P54760 987 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 AKAP17AQ02040 695 aaKnown RBP17.05■□□□□ 0.32
RTN4-210ENST00000427710 LAMC2Q13753 1193 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 C8orf34Q49A92 452 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 JAKMIP3Q5VZ66 844 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 KAT2BQ92831 832 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 SPATA33Q96N06 139 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
RTN4-210ENST00000427710 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 MLXIPQ9HAP2 919 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
RTN4-210ENST00000427710 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 RBAK-RBAKDNI3L0D1 243 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 KPNA6O60684 536 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 TIMP1P01033 207 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 CYP2C9P11712 490 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 IFNAR1P17181 557 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 ICAM3P32942 547 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 CYP2C18P33260 490 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 AK2P54819 239 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 ANAPC15P60006 121 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 SP4Q02446 784 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 DGKDQ16760 1214 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 C9orf50Q5SZB4 431 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 TDHQ8IZJ6 230 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 PPTC7Q8NI37 304 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 EMID1Q96A84 441 aaPredicted RBP17.04■□□□□ 0.32
RTN4-210ENST00000427710 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
RTN4-210ENST00000427710 LRCH3Q96II8 777 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 ANO3Q9BYT9 981 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
RTN4-210ENST00000427710 VPS54Q9P1Q0 977 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
RTN4-210ENST00000427710 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 FIBPO43427 364 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 ATP9AO75110 1047 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 STAM2O75886 525 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 TGFB3P10600 412 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 ITGB5P18084 799 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 PSEN2P49810 448 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
RTN4-210ENST00000427710 SCRN1Q12765 414 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 SHHQ15465 462 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 NLRX1Q86UT6 975 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
RTN4-210ENST00000427710 CYP2W1Q8TAV3 490 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 RNF26Q9BY78 433 aaPredicted RBP17.03■□□□□ 0.32
RTN4-210ENST00000427710 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
RTN4-210ENST00000427710 CPLX1O14810 134 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 LARGE1O95461 756 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 CLK2P49760 499 aaKnown RBP17.02■□□□□ 0.32
RTN4-210ENST00000427710 CCL23P55773 120 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 UIMC1Q96RL1 719 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 EHMT1Q9H9B1 1298 aa17.02■□□□□ 0.32
RTN4-210ENST00000427710 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.31
RTN4-210ENST00000427710 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.31
RTN4-210ENST00000427710 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 ACRP10323 421 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 FPGSQ05932 587 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 MFSD10Q14728 455 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
RTN4-210ENST00000427710 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
RTN4-210ENST00000427710 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
RTN4-210ENST00000427710 HIPK3Q9H422 1215 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 HDAC6Q9UBN7 1215 aa17.01■□□□□ 0.31
RTN4-210ENST00000427710 NOP56O00567 594 aaKnown RBP17■□□□□ 0.31
RTN4-210ENST00000427710 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
RTN4-210ENST00000427710 CSF2RAP15509 400 aa17■□□□□ 0.31
RTN4-210ENST00000427710 KCNA2P16389 499 aa17■□□□□ 0.31
RTN4-210ENST00000427710 NEK4P51957 841 aa17■□□□□ 0.31
RTN4-210ENST00000427710 NEDD9Q14511 834 aa17■□□□□ 0.31
RTN4-210ENST00000427710 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
RTN4-210ENST00000427710 UTP14CQ5TAP6 766 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms