RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 HIPK3Q9H422 1215 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 V9GY48 417 aaPredicted RBP22.06■■□□□ 1.12
COL9A2-204ENST00000427563 TRIP12Q14669 1992 aaPredicted RBP22.05■■□□□ 1.12
COL9A2-204ENST00000427563 TANC1Q9C0D5 1861 aa22.05■■□□□ 1.12
COL9A2-204ENST00000427563 STXBP3O00186 592 aa22.05■■□□□ 1.12
COL9A2-204ENST00000427563 PCNX4Q63HM2 1172 aa22.05■■□□□ 1.12
COL9A2-204ENST00000427563 GPR153Q6NV75 609 aa22.05■■□□□ 1.12
COL9A2-204ENST00000427563 CUL5Q93034 780 aa22.05■■□□□ 1.12
COL9A2-204ENST00000427563 SPATA31C2B4DYI2 1134 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 RBAK-RBAKDNI3L0D1 243 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 ADAMTS3O15072 1205 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 ZNF286BP0CG31 522 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 ACRP10323 421 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 TGFB3P10600 412 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 METAP2P50579 478 aaKnown RBP eCLIP22.04■■□□□ 1.12
COL9A2-204ENST00000427563 CCL23P55773 120 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 TOB2Q14106 344 aaPredicted RBP22.04■■□□□ 1.12
COL9A2-204ENST00000427563 DGKDQ16760 1214 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 TMEM240Q5SV17 173 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 KCNV1Q6PIU1 500 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
COL9A2-204ENST00000427563 HAS3O00219 553 aa22.03■■□□□ 1.12
COL9A2-204ENST00000427563 F2P00734 622 aa22.03■■□□□ 1.12
COL9A2-204ENST00000427563 EVCP57679 992 aa22.03■■□□□ 1.12
COL9A2-204ENST00000427563 FAM47CQ5HY64 1035 aa22.03■■□□□ 1.12
COL9A2-204ENST00000427563 GDF6Q6KF10 455 aaPredicted RBP22.03■■□□□ 1.12
COL9A2-204ENST00000427563 SPATA33Q96N06 139 aa22.03■■□□□ 1.12
COL9A2-204ENST00000427563 NAP1L2Q9ULW6 460 aaPredicted RBP22.03■■□□□ 1.12
COL9A2-204ENST00000427563 STAM2O75886 525 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 ITGB5P18084 799 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PSEN2P49810 448 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 FGD1P98174 961 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PTPN11Q06124 597 aaPredicted RBP22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PPIGQ13427 754 aaKnown RBP eCLIP22.02■■□□□ 1.122e-9■■□□□ 12.4
COL9A2-204ENST00000427563 HIC1Q14526 733 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 NTRK3Q16288 839 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PKN1Q16512 942 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 RASIP1Q5U651 963 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 RUFY3Q7L099 469 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 SESTD1Q86VW0 696 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 TMEM199Q8N511 208 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 SCLYQ96I15 445 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 RNPC3Q96LT9 517 aaKnown RBP22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PCDHA6Q9UN73 950 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 PCDHA8Q9Y5H6 950 aa22.02■■□□□ 1.12
COL9A2-204ENST00000427563 COL6A3P12111 3177 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 FIBPO43427 364 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 PSMA5P28066 241 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 CHMP4BP1P59074 171 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 FAM109BQ6ICB4 259 aaPredicted RBP22.01■■□□□ 1.11
COL9A2-204ENST00000427563 DHX38Q92620 1227 aaKnown RBP22.01■■□□□ 1.11
COL9A2-204ENST00000427563 PGBD1Q96JS3 809 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 C16orf70Q9BSU1 422 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 IL23AQ9NPF7 189 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 RIC8AQ9NPQ8 531 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 BARHL2Q9NY43 387 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 HDAC6Q9UBN7 1215 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 TET1Q8NFU7 2136 aa22.01■■□□□ 1.11
COL9A2-204ENST00000427563 CDH23Q9H251 3354 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 ATP9AO75110 1047 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 SUPT20HL2P0C7V6 817 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 PDIA3P30101 505 aaKnown RBP22■■□□□ 1.11
COL9A2-204ENST00000427563 CLK2P49760 499 aaKnown RBP22■■□□□ 1.11
COL9A2-204ENST00000427563 NAPAP54920 295 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 MFSD10Q14728 455 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 PFKFB3Q16875 520 aaPredicted RBP22■■□□□ 1.11
COL9A2-204ENST00000427563 GNPTABQ3T906 1256 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 PPP1R18Q6NYC8 613 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 XRRA1Q6P2D8 792 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 ZNF365Q70YC5 407 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 DEFB123Q8N688 67 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
COL9A2-204ENST00000427563 ALG1Q9BT22 464 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 UPF3BQ9BZI7 483 aaKnown RBP22■■□□□ 1.11
COL9A2-204ENST00000427563 TM6SF1Q9BZW5 370 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 TMEM260Q9NX78 707 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 UBIAD1Q9Y5Z9 338 aa22■■□□□ 1.11
COL9A2-204ENST00000427563 GBF1Q92538 1859 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 PPFIA3O75145 1194 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 PPFIA4O75335 1185 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 KCNA2P16389 499 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 KIAA0753Q2KHM9 967 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 CYFIP1Q7L576 1253 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 PHKBQ93100 1093 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 MLXIPQ9HAP2 919 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 NCOA5Q9HCD5 579 aaKnown RBP21.99■■□□□ 1.11
COL9A2-204ENST00000427563 MTMR10Q9NXD2 777 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 GTF2IRD1Q9UHL9 959 aa21.99■■□□□ 1.11
COL9A2-204ENST00000427563 SMCO2A6NFE2 343 aa21.98■■□□□ 1.11
COL9A2-204ENST00000427563 SMAD3P84022 425 aaKnown RBP21.98■■□□□ 1.11
COL9A2-204ENST00000427563 ZNF200P98182 395 aaPredicted RBP21.98■■□□□ 1.11
COL9A2-204ENST00000427563 METTL7BQ6UX53 244 aa21.98■■□□□ 1.11
COL9A2-204ENST00000427563 WNT8BQ93098 351 aa21.98■■□□□ 1.11
COL9A2-204ENST00000427563 GPR20Q99678 358 aa21.98■■□□□ 1.11
COL9A2-204ENST00000427563 CXXC1Q9P0U4 656 aaPredicted RBP21.98■■□□□ 1.11
COL9A2-204ENST00000427563 SPDYE3A6NKU9 549 aa21.97■■□□□ 1.11
COL9A2-204ENST00000427563 hCG_1984214I3L0E3 225 aa21.97■■□□□ 1.11
COL9A2-204ENST00000427563 PRPF3O43395 683 aaKnown RBP21.97■■□□□ 1.11
COL9A2-204ENST00000427563 LGALS2P05162 132 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms