RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 LAMA3Q16787 3333 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 ZNF286BP0CG31 522 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 PSEN2P49810 448 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 PTGISQ16647 500 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 HSDL1Q3SXM5 330 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 RPUSD2Q8IZ73 545 aaKnown RBP21.19■□□□□ 0.98
GPC1-205ENST00000427506 C7orf31Q8N865 590 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 RETREG2Q8NC44 543 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 KAT2BQ92831 832 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 KCNB2Q92953 911 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 INPP4AQ96PE3 977 aaPredicted RBP21.19■□□□□ 0.98
GPC1-205ENST00000427506 MTIF3Q9H2K0 278 aaKnown RBP21.19■□□□□ 0.98
GPC1-205ENST00000427506 PPP4R2Q9NY27 417 aa21.19■□□□□ 0.98
GPC1-205ENST00000427506 SPDYE3A6NKU9 549 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 FIBPO43427 364 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 PPFIA4O75335 1185 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 MFSD10Q14728 455 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 UBE2SQ16763 222 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 PCNX4Q63HM2 1172 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 XRRA1Q6P2D8 792 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 Q6ZUG5 572 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 CNTNAP5Q8WYK1 1306 aa21.18■□□□□ 0.98
GPC1-205ENST00000427506 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 SPATA31C2B4DYI2 1134 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 NOP56O00567 594 aaKnown RBP21.17■□□□□ 0.98
GPC1-205ENST00000427506 PSMA5P28066 241 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 ICAM3P32942 547 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 NAPAP54920 295 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 APOBRQ0VD83 1088 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 BFSP2Q13515 415 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 NEDD9Q14511 834 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 KIAA0753Q2KHM9 967 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 OTOP2Q7RTS6 562 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 NLRX1Q86UT6 975 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 BRF1Q92994 677 aa21.17■□□□□ 0.98
GPC1-205ENST00000427506 V9GY48 417 aaPredicted RBP21.17■□□□□ 0.98
GPC1-205ENST00000427506 F2P00734 622 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 METAP2P50579 478 aaKnown RBP eCLIP21.16■□□□□ 0.98
GPC1-205ENST00000427506 RCAN1P53805 252 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 GDF6Q6KF10 455 aaPredicted RBP21.16■□□□□ 0.98
GPC1-205ENST00000427506 CYFIP1Q7L576 1253 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 DEFB128Q7Z7B8 93 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 SESTD1Q86VW0 696 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 CCDC155Q8N6L0 562 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 HERVK_113Q902F9 699 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 EHMT1Q9H9B1 1298 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 HDAC6Q9UBN7 1215 aa21.16■□□□□ 0.98
GPC1-205ENST00000427506 CCDC196A0A1B0GTZ2 297 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 PITPNM1O00562 1244 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 RPS6KB1P23443 525 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 CDC27P30260 824 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 SEMA6BQ9H3T3 888 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 GTF2IRD1Q9UHL9 959 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 PCDHA6Q9UN73 950 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 STXBP5LQ9Y2K9 1186 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 PCDHA8Q9Y5H6 950 aa21.15■□□□□ 0.98
GPC1-205ENST00000427506 ZBBXA8MT70 800 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 HAS3O00219 553 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 HOXD8P13378 290 aaPredicted RBP21.14■□□□□ 0.97
GPC1-205ENST00000427506 DNAJB2P25686 324 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 ADD1P35611 737 aaKnown RBP21.14■□□□□ 0.97
GPC1-205ENST00000427506 FUT2Q10981 343 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 SEMA3FQ13275 785 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 RASIP1Q5U651 963 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 PPP1R18Q6NYC8 613 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 METTL7BQ6UX53 244 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 GUCD1Q96NT3 240 aa21.14■□□□□ 0.97
GPC1-205ENST00000427506 FAM217BQ9NTX9 383 aaPredicted RBP21.14■□□□□ 0.97
GPC1-205ENST00000427506 GRXCR1A8MXD5 290 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 hCG_1984214I3L0E3 225 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 PFKMP08237 780 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 IQCF3P0C7M6 154 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 RFC2P35250 354 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 SP4Q02446 784 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 ZNF713Q8N859 430 aaPredicted RBP21.13■□□□□ 0.97
GPC1-205ENST00000427506 CAGE1Q8TC20 777 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 CDHR1Q96JP9 859 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 CXXC1Q9P0U4 656 aaPredicted RBP21.13■□□□□ 0.97
GPC1-205ENST00000427506 MYH7BA7E2Y1 1941 aa21.13■□□□□ 0.97
GPC1-205ENST00000427506 TMEM265A0A087WTH1 108 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 SMCO2A6NFE2 343 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 H3BRB1 525 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 EPB41L2O43491 1005 aaKnown RBP21.12■□□□□ 0.97
GPC1-205ENST00000427506 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
GPC1-205ENST00000427506 ADCY7P51828 1080 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 GIMAP8Q8ND71 665 aaPredicted RBP21.12■□□□□ 0.97
GPC1-205ENST00000427506 GPRASP2Q96D09 838 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 SENP7Q9BQF6 1050 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 C16orf70Q9BSU1 422 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 FTOQ9C0B1 505 aaKnown RBP eCLIP21.12■□□□□ 0.97
GPC1-205ENST00000427506 TTYH1Q9H313 450 aaPredicted RBP21.12■□□□□ 0.97
GPC1-205ENST00000427506 TUT1Q9H6E5 874 aaKnown RBP21.12■□□□□ 0.97
GPC1-205ENST00000427506 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
GPC1-205ENST00000427506 STXBP3O00186 592 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 LGALS2P05162 132 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 ACTN1P12814 892 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms