RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 NLRX1Q86UT6 975 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 GLT8D2Q9H1C3 349 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 HIPK3Q9H422 1215 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 MLXIPQ9HAP2 919 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 PCDHA6Q9UN73 950 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 PCDHA8Q9Y5H6 950 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 SMCO2A6NFE2 343 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 SCG2P13521 617 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 EVCP57679 992 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 PTPN11Q06124 597 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 NEDD9Q14511 834 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 PFKFB3Q16875 520 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 MYSM1Q5VVJ2 828 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 TMEM199Q8N511 208 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 KATNAL1Q9BW62 490 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-205ENST00000426678 SPATA31C2B4DYI2 1134 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 SOX1O00570 391 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 ANAPC15P60006 121 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 CCT2P78371 535 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 SP2Q02086 613 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.267e-10■■■■■ 38.3
NCKIPSD-205ENST00000426678 PHKBQ93100 1093 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 CDHR1Q96JP9 859 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 SLC26A6Q9BXS9 759 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 RNF26Q9BY78 433 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 NOD1Q9Y239 953 aa16.66■□□□□ 0.26
NCKIPSD-205ENST00000426678 CPLX1O14810 134 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 PPFIA4O75335 1185 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 FOSP01100 380 aaPredicted RBP16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 ZNF286BP0CG31 522 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 IFNAR1P17181 557 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 AP3B2Q13367 1082 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 SHHQ15465 462 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 HSDL1Q3SXM5 330 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 C9orf50Q5SZB4 431 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 METTL7BQ6UX53 244 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 PPP1R13LQ8WUF5 828 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 ANO3Q9BYT9 981 aa16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-205ENST00000426678 F2P00734 622 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 CYP2C9P11712 490 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 CYP2C18P33260 490 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 PSEN2P49810 448 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 EPHB4P54760 987 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 MFSD10Q14728 455 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 NTRK3Q16288 839 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 CPLX2Q6PUV4 134 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 GIMAP8Q8ND71 665 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 KAT2BQ92831 832 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 PGBD1Q96JS3 809 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 RNPC3Q96LT9 517 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 SENP7Q9BQF6 1050 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 C6orf50Q9HD87 102 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 DOCK5Q9H7D0 1870 aa16.64■□□□□ 0.25
NCKIPSD-205ENST00000426678 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 CSF2RAP15509 400 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 STK3Q13188 491 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 MTMR1Q13613 665 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 PKN1Q16512 942 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 UBIAD1Q9Y5Z9 338 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 UMODL1Q5DID0 1318 aa16.63■□□□□ 0.25
NCKIPSD-205ENST00000426678 ITGB5P18084 799 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 GNA11P29992 359 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 CCL23P55773 120 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 SP4Q02446 784 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 PTGISQ16647 500 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 JAKMIP3Q5VZ66 844 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 PSRC1Q6PGN9 363 aaPredicted RBP16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 REXO1Q8N1G1 1221 aaKnown RBP16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 ZMYND12Q9H0C1 365 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 JADE2Q9NQC1 790 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms