RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 HAS3O00219 553 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 DCXO43602 365 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 SORBS3O60504 671 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 PPFIA4O75335 1185 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 UPP2O95045 317 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 CFBP00751 764 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
PDAP1-202ENST00000426447 GPM6BQ13491 265 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 MBTPS1Q14703 1052 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
PDAP1-202ENST00000426447 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 MRE11P49959 708 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 HTRA4P83105 476 aaPredicted RBP17.1■□□□□ 0.33
PDAP1-202ENST00000426447 QRICH1Q2TAL8 776 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 IQCA1Q86XH1 822 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
PDAP1-202ENST00000426447 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 H3BNC9 293 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 TCEAL5Q5H9L2 206 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 KCNV1Q6PIU1 500 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 TMEM192Q8IY95 271 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
PDAP1-202ENST00000426447 SEPT8Q92599 483 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
PDAP1-202ENST00000426447 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
PDAP1-202ENST00000426447 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 ZNF213O14771 459 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 GGPS1O95749 300 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
PDAP1-202ENST00000426447 HIC1Q14526 733 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 HSDL1Q3SXM5 330 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 ASPRV1Q53RT3 343 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 PLEKHG4Q58EX7 1191 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.32
PDAP1-202ENST00000426447 SERINC5Q86VE9 423 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 TBC1D10CQ8IV04 446 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
PDAP1-202ENST00000426447 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
PDAP1-202ENST00000426447 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 PRKAG3Q9UGI9 489 aa17.08■□□□□ 0.32
PDAP1-202ENST00000426447 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
PDAP1-202ENST00000426447 MFAP1P55081 439 aaKnown RBP17.07■□□□□ 0.32
PDAP1-202ENST00000426447 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
PDAP1-202ENST00000426447 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 ZNF589Q86UQ0 364 aaPredicted RBP17.07■□□□□ 0.32
PDAP1-202ENST00000426447 FBXL18Q96ME1 805 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 KCNH6Q9H252 994 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 JMJD4Q9H9V9 463 aa17.07■□□□□ 0.32
PDAP1-202ENST00000426447 NEDD4P46934 1319 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 H3BRB1 525 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 NCK2O43639 380 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 KDM4AO75164 1064 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 CTSHP09668 335 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 PDE1AP54750 535 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 NHLH1Q02575 133 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 C16orf70Q9BSU1 422 aa17.06■□□□□ 0.32
PDAP1-202ENST00000426447 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
PDAP1-202ENST00000426447 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
PDAP1-202ENST00000426447 TGFB3P10600 412 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 HOXD8P13378 290 aaPredicted RBP17.05■□□□□ 0.32
PDAP1-202ENST00000426447 ZP2Q05996 745 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
PDAP1-202ENST00000426447 TICAM2Q86XR7 235 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 ADHFE1Q8IWW8 467 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 FIBCD1Q8N539 461 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
PDAP1-202ENST00000426447 PDCD2LQ9BRP1 358 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 SIP14410 1827 aa17.05■□□□□ 0.32
PDAP1-202ENST00000426447 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
PDAP1-202ENST00000426447 TREHO43280 583 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 RGS20O76081 388 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 GNAT1P11488 350 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 NT5C2P49902 561 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 HSD17B4P51659 736 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 SP2Q02086 613 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 VSIG10LQ86VR7 867 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
PDAP1-202ENST00000426447 IL17RAQ96F46 866 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms