RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 MCF2L2Q86YR7 1114 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ANKRD35Q8N283 1001 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 NPLOC4Q8TAT6 608 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 SYTL5Q8TDW5 730 aaPredicted RBP8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 SOCS4Q8WXH5 440 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ALG1Q9BT22 464 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PHF20Q9BVI0 1012 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 VPS54Q9P1Q0 977 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 COL20A1Q9P218 1284 aa8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CASP8AP2Q9UKL3 1982 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MYH6P13533 1939 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DXOO77932 396 aaKnown RBP8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CFBP00751 764 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 HOXD10P28358 340 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MMP16P51512 607 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 RNF207Q6ZRF8 634 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CTU1Q7Z7A3 348 aaKnown RBP8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DPP9Q86TI2 863 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DAGLBQ8NCG7 672 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MORC4Q8TE76 937 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 WASF1Q92558 559 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MAML3Q96JK9 1138 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TAAR1Q96RJ0 339 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PSTPIP2Q9H939 334 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 FLRT1Q9NZU1 646 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PTPN22Q9Y2R2 807 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TRIM17Q9Y577 477 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ZNFX1Q9P2E3 1918 aaKnown RBP8.11□□□□□ -1.11
CHCHD3P1-201ENST00000425516 FRMPD4Q14CM0 1322 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 LCTP09848 1927 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 LOC102724159A0A0B4J2E5 919 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 EDIL3O43854 480 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 POLR2MP0CAP2 368 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CYP2B6P20813 491 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 EDNRBP24530 442 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 GJB2P29033 226 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 HOXA13P31271 388 aaPredicted RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 RGS2P41220 211 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MRPL12P52815 198 aaKnown RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PWP2Q15269 919 aaKnown RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CCL14Q16627 93 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 UBE2SQ16763 222 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ZNF697Q5TEC3 545 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 KRT40Q6A162 431 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 GALNT17Q6IS24 598 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CCDC12Q8WUD4 166 aaPredicted RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CRYGNQ8WXF5 182 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CUL5Q93034 780 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 APBA2Q99767 749 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 GLT8D2Q9H1C3 349 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 C6orf50Q9HD87 102 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 KCNJ14Q9UNX9 436 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PTCH2Q9Y6C5 1203 aa8.1□□□□□ -1.11
CHCHD3P1-201ENST00000425516 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ADCY3O60266 1144 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 SNAI1O95863 264 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 FOSP01100 380 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MMP1P03956 469 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CALML3P27482 149 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 GNA11P29992 359 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ALDH5A1P51649 535 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ADCY7P51828 1080 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 NLRP5P59047 1200 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PKN2Q16513 984 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 FBXO46Q6PJ61 603 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 Q6ZNB5 142 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 ZNF598Q86UK7 904 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 BLIDQ8IZY5 108 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 MSL3Q8N5Y2 521 aaKnown RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 BICD2Q8TD16 824 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TRIB2Q92519 343 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TNFRSF25Q93038 417 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 KATNBL1Q9H079 304 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PXMP2Q9NR77 195 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 SLC5A4Q9NY91 659 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 BIN2Q9UBW5 565 aaPredicted RBP8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PCDHA6Q9UN73 950 aa8.09□□□□□ -1.11
CHCHD3P1-201ENST00000425516 PCDHA4Q9UN74 947 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms