RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LY6KQ17RY6 165 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 GPT2Q8TD30 523 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 MTMR9Q96QG7 549 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 NUDT12Q9BQG2 462 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 ADD3Q9UEY8 706 aaKnown RBP15.21■□□□□ 0.03
PRPF39-202ENST00000424478 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.03
PRPF39-202ENST00000424478 MEIS1O00470 390 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 IRX5P78411 483 aaPredicted RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 STXBP2Q15833 593 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 SLC15A5A6NIM6 579 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 SNAI1O95863 264 aaPredicted RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 CIITAP33076 1130 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 LRRC37A2A6NM11 1700 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
PRPF39-202ENST00000424478 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
PRPF39-202ENST00000424478 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
PRPF39-202ENST00000424478 CYP3A7P24462 503 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 DTHD1Q6ZMT9 781 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 JADE2Q9NQC1 790 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 ADCY6O43306 1168 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 EDNRBP24530 442 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 ADCYAP1R1P41586 468 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 NCAPH2Q6IBW4 605 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 TRIB2Q92519 343 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.19■□□□□ 0.02
PRPF39-202ENST00000424478 CEP131Q9UPN4 1083 aa15.19■□□□□ 0.02
PRPF39-202ENST00000424478 A0A087X0B3 334 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 EML1O00423 815 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 CYP4A11Q02928 519 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 Q4G0T1 1027 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 USP6NLQ92738 828 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 INPP4AQ96PE3 977 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 TINF2Q9BSI4 451 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 AGO4Q9HCK5 861 aaKnown RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 SRPRBQ9Y5M8 271 aaKnown RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 NDUFA8P51970 172 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 ABRAQ8N0Z2 381 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
PRPF39-202ENST00000424478 MCTP2Q6DN12 878 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 CYFIP1Q7L576 1253 aa15.18■□□□□ 0.02
PRPF39-202ENST00000424478 GAS7O60861 476 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 NR1I2O75469 434 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
PRPF39-202ENST00000424478 KIF22Q14807 665 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
PRPF39-202ENST00000424478 ATL3Q6DD88 541 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 PPP1R13LQ8WUF5 828 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 FKTNO75072 461 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 PPP6R2O75170 966 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 RGS2P41220 211 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRPF39-202ENST00000424478 LRRC15Q8TF66 581 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 STAMQ92783 540 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 SH2D3AQ9BRG2 576 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 UNC45AQ9H3U1 944 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 RGL1Q9NZL6 768 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 TRIM17Q9Y577 477 aa15.17■□□□□ 0.02
PRPF39-202ENST00000424478 DHX15O43143 795 aaKnown RBP15.16■□□□□ 0.02
PRPF39-202ENST00000424478 PFKFB1P16118 471 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 ECM1Q16610 540 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 TMEM87AQ8NBN3 555 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
PRPF39-202ENST00000424478 VAV3Q9UKW4 847 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 CCNE2O96020 404 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 UBA1P22314 1058 aaKnown RBP15.16■□□□□ 0.02
PRPF39-202ENST00000424478 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 APBA2Q99767 749 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 ELP1O95163 1332 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 FOXN1O15353 648 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 KCNA2P16389 499 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 CAMK4Q16566 473 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 ADALQ6DHV7 355 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 TAPT1Q6NXT6 567 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 LRWD1Q9UFC0 647 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 SAMM50Q9Y512 469 aa15.16■□□□□ 0.02
PRPF39-202ENST00000424478 ZBTB39O15060 712 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 PSMD10O75832 226 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 MOXD1Q6UVY6 613 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 GRAMD1CQ8IYS0 662 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms