RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 FUCA1P04066 466 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 NTRK1P04629 796 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 PLS3P13797 630 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 NASPP49321 788 aaPredicted RBP3.67□□□□□ -1.82
PMS1-209ENST00000424059 RPL11P62913 178 aaKnown RBP3.67□□□□□ -1.82
PMS1-209ENST00000424059 SCRN1Q12765 414 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 ACBD5Q5T8D3 534 aaPredicted RBP3.67□□□□□ -1.82
PMS1-209ENST00000424059 FERMT3Q86UX7 667 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 EVI5LQ96CN4 794 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 TRIM44Q96DX7 344 aaPredicted RBP3.67□□□□□ -1.82
PMS1-209ENST00000424059 MRGPRX3Q96LB0 322 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 WRNIP1Q96S55 665 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 RBM15Q96T37 977 aaKnown RBP eCLIP3.67□□□□□ -1.82
PMS1-209ENST00000424059 GORASP1Q9BQQ3 440 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 C1QTNF3Q9BXJ4 246 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 SMPD4Q9NXE4 827 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 CLEC1BQ9P126 229 aa3.67□□□□□ -1.82
PMS1-209ENST00000424059 UNCXA6NJT0 531 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 MYO1BO43795 1136 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 CYP7B1O75881 506 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 KCNH1O95259 989 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 THBDP07204 575 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 RALBP1Q15311 655 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 PPP2R5EQ16537 467 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 CPZQ66K79 652 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 CASC1Q6TDU7 716 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 NPLOC4Q8TAT6 608 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 ANP32BQ92688 251 aaKnown RBP3.66□□□□□ -1.82
PMS1-209ENST00000424059 DDX11Q96FC9 970 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 CCDC140Q96MF4 163 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 TGIF2Q9GZN2 237 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 NKX2-4Q9H2Z4 354 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 TMPRSS5Q9H3S3 457 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 BCAS3Q9H6U6 928 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 RXFP1Q9HBX9 757 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 ZNF652Q9Y2D9 606 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 DUSP10Q9Y6W6 482 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 X6R8D5 127 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 MROH6A6NGR9 719 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 PPFIA4O75335 1185 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 HSP90AA2PQ14568 343 aaPredicted RBP3.66□□□□□ -1.82
PMS1-209ENST00000424059 GORABQ5T7V8 394 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 GTF2IRD2BQ6EKJ0 949 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 GTF2IRD2Q86UP8 949 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 DDX1Q92499 740 aaKnown RBP3.66□□□□□ -1.82
PMS1-209ENST00000424059 MARCH2Q9P0N8 246 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 APEX2Q9UBZ4 518 aa3.66□□□□□ -1.82
PMS1-209ENST00000424059 TIMM13Q9Y5L4 95 aaPredicted RBP3.66□□□□□ -1.82
PMS1-209ENST00000424059 C22orf46C9J442 243 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 H7BY64 318 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 CPP00450 1065 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 SCG5P05408 212 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 INSRRP14616 1297 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 KRTAP5-9P26371 169 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 HOXC12P31275 282 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 RGS3P49796 1198 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 FOXD4Q12950 439 aaPredicted RBP3.65□□□□□ -1.82
PMS1-209ENST00000424059 RGL3Q3MIN7 710 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 TNNI3KQ59H18 835 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 PRR31Q5SQ13 230 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 NT5DC4Q86YG4 428 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 DPF3Q92784 378 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 MKL1Q969V6 931 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 TSPAN18Q96SJ8 248 aa3.65□□□□□ -1.82
PMS1-209ENST00000424059 COA3Q9Y2R0 106 aaPredicted RBP3.65□□□□□ -1.82
PMS1-209ENST00000424059 SGSM2O43147 1006 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 APPP05067 770 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 ITGA1P56199 1179 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 HDLBPQ00341 1268 aaKnown RBP3.65□□□□□ -1.83
PMS1-209ENST00000424059 SMAD4Q13485 552 aaKnown RBP3.65□□□□□ -1.83
PMS1-209ENST00000424059 PUM1Q14671 1186 aaKnown RBP eCLIP3.65□□□□□ -1.83
PMS1-209ENST00000424059 MBLAC2Q68D91 279 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 FRS2Q8WU20 508 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 DIO2Q92813 273 aa3.65□□□□□ -1.83
PMS1-209ENST00000424059 FANCIQ9NVI1 1328 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 CCER2I3L3R5 266 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 MEFVO15553 781 aaPredicted RBP3.64□□□□□ -1.83
PMS1-209ENST00000424059 ZNF28P17035 718 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 NKX3-2P78367 333 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 TBC1D10BQ4KMP7 808 aaPredicted RBP3.64□□□□□ -1.83
PMS1-209ENST00000424059 EMC4Q5J8M3 183 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 CYP4F22Q6NT55 531 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 CD300LDQ6UXZ3 194 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 LCORQ96JN0 433 aaPredicted RBP3.64□□□□□ -1.83
PMS1-209ENST00000424059 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 HSPBP1Q9NZL4 362 aa3.64□□□□□ -1.83
PMS1-209ENST00000424059 TCERG1O14776 1098 aaKnown RBP3.63□□□□□ -1.83
PMS1-209ENST00000424059 ZNF20P17024 532 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 TNFRSF1AP19438 455 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 KRBA2Q6ZNG9 492 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 TXNDC5Q8NBS9 432 aaKnown RBP3.63□□□□□ -1.83
PMS1-209ENST00000424059 PHOSPHO1Q8TCT1 267 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 MICAL1Q8TDZ2 1067 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 DVL3Q92997 716 aaPredicted RBP3.63□□□□□ -1.83
PMS1-209ENST00000424059 LOXL4Q96JB6 756 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 TMEM209Q96SK2 561 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 EPN3Q9H201 632 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 CCSER2Q9H7U1 834 aa3.63□□□□□ -1.83
PMS1-209ENST00000424059 SIT1Q9Y3P8 196 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms