RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 FBXL18Q96ME1 805 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 FAM50BQ9Y247 325 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 ZMYM6O95789 1325 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 SALL3Q9BXA9 1300 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 WDFY4Q6ZS81 3184 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 RSPH10B2B2RC85 870 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 RSPH10BP0C881 870 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 ZP2Q05996 745 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 CDC37Q16543 378 aaPredicted RBP19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 ARHGEF16Q5VV41 709 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 SERINC5Q86VE9 423 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 DGKHQ86XP1 1220 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 DHX37Q8IY37 1157 aaKnown RBP19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 MIER1Q8N108 512 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 TOP1MTQ969P6 601 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 CPVLQ9H3G5 476 aa19.58■□□□□ 0.73
CHCHD3-202ENST00000423635 RBAK-RBAKDNI3L0D1 243 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 NR3C2P08235 984 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 ZNF286BP0CG31 522 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 HSPD1P10809 573 aaKnown RBP19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 GPM6BQ13491 265 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 MCMDC2Q4G0Z9 681 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 TCEAL5Q5H9L2 206 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 MFSD6Q6ZSS7 791 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 TICAM2Q86XR7 235 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 MRVI1Q9Y6F6 885 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 MICAL3Q7RTP6 2002 aa19.57■□□□□ 0.72
CHCHD3-202ENST00000423635 MYSM1Q5VVJ2 828 aa19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 ADHFE1Q8IWW8 467 aa19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 TMEM192Q8IY95 271 aa19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 ADGRF4Q8IZF3 695 aa19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 NSUN3Q9H649 340 aaKnown RBP19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 PXMP2Q9NR77 195 aa19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 MRPL11Q9Y3B7 192 aaKnown RBP19.56■□□□□ 0.72
CHCHD3-202ENST00000423635 NCK2O43639 380 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 RGS20O76081 388 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 EIF2AK2P19525 551 aaKnown RBP19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 THPOP40225 353 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 HSDL1Q3SXM5 330 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 KCNV1Q6PIU1 500 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 C16orf70Q9BSU1 422 aa19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 UPF3BQ9BZI7 483 aaKnown RBP19.55■□□□□ 0.72
CHCHD3-202ENST00000423635 HOXC8P31273 242 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 NT5C2P49902 561 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 HAND2P61296 217 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 GHRHRQ02643 423 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 CELF3Q5SZQ8 465 aaKnown RBP19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 FBXO11Q86XK2 927 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 ANKS1AQ92625 1134 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 FAM227BQ96M60 508 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 YME1L1Q96TA2 773 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 COL4A6Q14031 1691 aa19.54■□□□□ 0.72
CHCHD3-202ENST00000423635 MYH7BA7E2Y1 1941 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 LTBRP36941 435 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 CTC1Q2NKJ3 1217 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 QRICH1Q2TAL8 776 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 CCDC178Q5BJE1 867 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 PNMA1Q8ND90 353 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 SEPT8Q92599 483 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 ESR2Q92731 530 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 RNF41Q9H4P4 317 aaPredicted RBP19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 MAP3K20Q9NYL2 800 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 PCDHB15Q9Y5E8 787 aa19.53■□□□□ 0.72
CHCHD3-202ENST00000423635 A0A0D9SFI3 127 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 C17orf102A2RUQ5 167 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 CAND2O75155 1236 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 TGFB3P10600 412 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 IRS1P35568 1242 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 HSD17B4P51659 736 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 HFE2Q6ZVN8 426 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 VSIG10LQ86VR7 867 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 TBC1D10CQ8IV04 446 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 ATP6V0A1Q93050 837 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 MFSD14AQ96MC6 490 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 ZKSCAN3Q9BRR0 538 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 CLDND1Q9NY35 253 aa19.52■□□□□ 0.72
CHCHD3-202ENST00000423635 C5orf67F2Z3F1 127 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 OPLAHO14841 1288 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 CFBP00751 764 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 SP2Q02086 613 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 SMAD2Q15796 467 aaKnown RBP19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 ASPRV1Q53RT3 343 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 EP400NLQ6ZTU2 488 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 STOX1Q6ZVD7 989 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 ZNF589Q86UQ0 364 aaPredicted RBP19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 PDCD2LQ9BRP1 358 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 JMJD4Q9H9V9 463 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 ZNF318Q5VUA4 2279 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 TRIOO75962 3097 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 H3BRB1 525 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 TREHO43280 583 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 UPP2O95045 317 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 GGPS1O95749 300 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 RB1P06400 928 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 HERC4Q5GLZ8 1057 aaPredicted RBP19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 RPAINQ86UA6 219 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 SAMD3Q8N6K7 520 aa19.51■□□□□ 0.71
CHCHD3-202ENST00000423635 APBB2Q92870 758 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms