RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 SYNE3Q6ZMZ3 975 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 HEATR3Q7Z4Q2 680 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 DHX37Q8IY37 1157 aaKnown RBP17.82■□□□□ 0.44
SPC24-201ENST00000423327 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 BRF1Q92994 677 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 MTMR10Q9NXD2 777 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 HAS3O00219 553 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 F2P00734 622 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
SPC24-201ENST00000423327 RCAN1P53805 252 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 DGKDQ16760 1214 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 PCNX4Q63HM2 1172 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 FBXL16Q8N461 479 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 SCLYQ96I15 445 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 PSTPIP2Q9H939 334 aa17.81■□□□□ 0.44
SPC24-201ENST00000423327 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
SPC24-201ENST00000423327 TET1Q8NFU7 2136 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 SPATA31C2B4DYI2 1134 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 TGFB3P10600 412 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 CASTP20810 708 aaKnown RBP17.8■□□□□ 0.44
SPC24-201ENST00000423327 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
SPC24-201ENST00000423327 HIC1Q14526 733 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 GDF6Q6KF10 455 aaPredicted RBP17.8■□□□□ 0.44
SPC24-201ENST00000423327 KCNV1Q6PIU1 500 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 ZNF365Q70YC5 407 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 DHX38Q92620 1227 aaKnown RBP17.8■□□□□ 0.44
SPC24-201ENST00000423327 CUL5Q93034 780 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 SPATA33Q96N06 139 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 IL23AQ9NPF7 189 aa17.8■□□□□ 0.44
SPC24-201ENST00000423327 STXBP3O00186 592 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 STAM2O75886 525 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 PSEN2P49810 448 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPC24-201ENST00000423327 CHMP4BP1P59074 171 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 SMAD3P84022 425 aaKnown RBP17.79■□□□□ 0.44
SPC24-201ENST00000423327 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 C16orf70Q9BSU1 422 aa17.79■□□□□ 0.44
SPC24-201ENST00000423327 CXXC1Q9P0U4 656 aaPredicted RBP17.79■□□□□ 0.44
SPC24-201ENST00000423327 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
SPC24-201ENST00000423327 GBF1Q92538 1859 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 FIBPO43427 364 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 EPB41L2O43491 1005 aaKnown RBP17.78■□□□□ 0.44
SPC24-201ENST00000423327 ITGB5P18084 799 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
SPC24-201ENST00000423327 MFSD10Q14728 455 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 GNPTABQ3T906 1256 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
SPC24-201ENST00000423327 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 ALG1Q9BT22 464 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 TTYH1Q9H313 450 aaPredicted RBP17.78■□□□□ 0.44
SPC24-201ENST00000423327 HDAC6Q9UBN7 1215 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 GTF2IRD1Q9UHL9 959 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
SPC24-201ENST00000423327 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
SPC24-201ENST00000423327 NAPAP54920 295 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 PKN1Q16512 942 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 KIAA0753Q2KHM9 967 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 PPP1R18Q6NYC8 613 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 CYFIP1Q7L576 1253 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 WNT8BQ93098 351 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 ZSWIM6Q9HCJ5 1215 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 RIC8AQ9NPQ8 531 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 UBIAD1Q9Y5Z9 338 aa17.77■□□□□ 0.44
SPC24-201ENST00000423327 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 ATP9AO75110 1047 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 LGALS2P05162 132 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 KCNA2P16389 499 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
SPC24-201ENST00000423327 EVCP57679 992 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 FGD1P98174 961 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 ZNF200P98182 395 aaPredicted RBP17.76■□□□□ 0.43
SPC24-201ENST00000423327 NTRK3Q16288 839 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 PTGISQ16647 500 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 METTL7BQ6UX53 244 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 GPR20Q99678 358 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 MLXIPQ9HAP2 919 aa17.76■□□□□ 0.43
SPC24-201ENST00000423327 hCG_1984214I3L0E3 225 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 PSMA5P28066 241 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 HOXC8P31273 242 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 NEDD9Q14511 834 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 GPNMBQ14956 572 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
SPC24-201ENST00000423327 RUFY3Q7L099 469 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms