RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MS4A14Q96JA4 679 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 TRAF5O00463 557 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 IL1R1P14778 569 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 LRRC63Q05C16 580 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 EHHADHQ08426 723 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.398e-7■■■■□ 21
CDH1-202ENST00000422392 DNAJC19Q96DA6 116 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
CDH1-202ENST00000422392 NHSQ6T4R5 1651 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 ANKRD65E5RJM6 399 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 E9PMD0 336 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 LCA5LO95447 670 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 PLCG2P16885 1265 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 NOVP48745 357 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 GTF2IP78347 998 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 ARID5AQ03989 594 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 HGSNATQ68CP4 663 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 PDXDC1Q6P996 788 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 KCTD1Q719H9 257 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 SRLQ86TD4 932 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 DDX25Q9UHL0 483 aaKnown RBP17.48■□□□□ 0.39
CDH1-202ENST00000422392 RRP15Q9Y3B9 282 aaKnown RBP17.48■□□□□ 0.39
CDH1-202ENST00000422392 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 FOCADQ5VW36 1801 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 C6orf229H3BNL8 230 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 RAD21O60216 631 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 MARCH6O60337 910 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 CCDC40Q4G0X9 1142 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 TMEM119Q4V9L6 283 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 MYOCDQ8IZQ8 938 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
CDH1-202ENST00000422392 AENQ8WTP8 325 aaKnown RBP17.48■□□□□ 0.39
CDH1-202ENST00000422392 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 TLR2O60603 784 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
CDH1-202ENST00000422392 PDIA5Q14554 519 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 CCDC181Q5TID7 509 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 IQCEQ6IPM2 695 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 MXD3Q9BW11 206 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 PANK4Q9NVE7 773 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 RSPH14Q9UHP6 348 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 NOL4O94818 638 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 FGFR1OPO95684 399 aaKnown RBP17.47■□□□□ 0.39
CDH1-202ENST00000422392 ASTE1Q2TB18 679 aaPredicted RBP17.47■□□□□ 0.39
CDH1-202ENST00000422392 ASPRV1Q53RT3 343 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
CDH1-202ENST00000422392 MMGT1Q8N4V1 131 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 TSG101Q99816 390 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 TLR10Q9BXR5 811 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 FAM184BQ9ULE4 1060 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 GAKO14976 1311 aa17.47■□□□□ 0.39
CDH1-202ENST00000422392 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 POLR2FP61218 127 aaKnown RBP17.46■□□□□ 0.39
CDH1-202ENST00000422392 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
CDH1-202ENST00000422392 KLHDC7AQ5VTJ3 777 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 TBC1D16Q8TBP0 767 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
CDH1-202ENST00000422392 COL4A3BPQ9Y5P4 624 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 ATP2B4P23634 1241 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 RIC8AQ9NPQ8 531 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 KIAA1024Q9UPX6 916 aa17.46■□□□□ 0.39
CDH1-202ENST00000422392 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 POTECB2RU33 542 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 GABPAQ06546 454 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 ZNF543Q08ER8 600 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 CCDC70Q6NSX1 233 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 POTEBQ6S5H4 581 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 IQCDQ96DY2 449 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 LSM14BQ9BX40 385 aaKnown RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 PACSIN2Q9UNF0 486 aaPredicted RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 ZSCAN5CA6NGD5 496 aaPredicted RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 IVLP07476 585 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms