RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SEPT4O43236 478 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 TGFB3P10600 412 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 AKR1A1P14550 325 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 CCND3P30281 292 aaPredicted RBP19.91■□□□□ 0.78
LINC00271-201ENST00000421378 ICAM3P32942 547 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 TOB1P50616 345 aaPredicted RBP19.91■□□□□ 0.78
LINC00271-201ENST00000421378 Q4G0T1 1027 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 TTC38Q5R3I4 469 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 LENG9Q96B70 501 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 MBOAT7Q96N66 472 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 ZDHHC9Q9Y397 364 aa19.91■□□□□ 0.78
LINC00271-201ENST00000421378 RBM47A0AV96 593 aaKnown RBP19.9■□□□□ 0.78
LINC00271-201ENST00000421378 SPATA31C2B4DYI2 1134 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 SLC37A4O43826 429 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 MCM7P33993 719 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 NBR1Q14596 966 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 IQSEC1Q6DN90 963 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 ARMC5Q96C12 935 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 FAM184BQ9ULE4 1060 aa19.9■□□□□ 0.78
LINC00271-201ENST00000421378 CIZ1Q9ULV3 898 aaPredicted RBP19.9■□□□□ 0.78
LINC00271-201ENST00000421378 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.89■□□□□ 0.77
LINC00271-201ENST00000421378 NEMFO60524 1076 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 ARIH2O95376 493 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 ARP10275 920 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 TXNP10599 105 aaKnown RBP19.89■□□□□ 0.77
LINC00271-201ENST00000421378 TNFAIP2Q03169 654 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 SEMA3FQ13275 785 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 ORC2Q13416 577 aaPredicted RBP19.89■□□□□ 0.77
LINC00271-201ENST00000421378 FAM173BQ6P4H8 233 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 CCDC62Q6P9F0 684 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 ZNF333Q96JL9 665 aa19.89■□□□□ 0.77
LINC00271-201ENST00000421378 MYCP01106 439 aaPredicted RBP19.88■□□□□ 0.77
LINC00271-201ENST00000421378 SMPD1P17405 629 aa19.88■□□□□ 0.77
LINC00271-201ENST00000421378 UBA1P22314 1058 aaKnown RBP19.88■□□□□ 0.77
LINC00271-201ENST00000421378 LY6KQ17RY6 165 aa19.88■□□□□ 0.77
LINC00271-201ENST00000421378 DUSP28Q4G0W2 176 aa19.88■□□□□ 0.77
LINC00271-201ENST00000421378 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
LINC00271-201ENST00000421378 DDX41Q9UJV9 622 aaKnown RBP19.88■□□□□ 0.77
LINC00271-201ENST00000421378 PCDHB6Q9Y5E3 794 aa19.88■□□□□ 0.77
LINC00271-201ENST00000421378 IPO5O00410 1097 aaKnown RBP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 ADCY6O43306 1168 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 MTFR1Q15390 333 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 ZNF174Q15697 407 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 SENP7Q9BQF6 1050 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 ZNF577Q9BSK1 485 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 UNC93B1Q9H1C4 597 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 AGO4Q9HCK5 861 aaKnown RBP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 PKD2L1Q9P0L9 805 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 MYH15Q9Y2K3 1946 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 NKRFO15226 690 aaKnown RBP eCLIP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 MSH4O15457 936 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 MSCO60682 206 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 SP2Q02086 613 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 TMEM63BQ5T3F8 832 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 LENG1Q96BZ8 264 aaPredicted RBP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 RNF208Q9H0X6 261 aa19.87■□□□□ 0.77
LINC00271-201ENST00000421378 DDX20Q9UHI6 824 aaKnown RBP19.87■□□□□ 0.77
LINC00271-201ENST00000421378 ATP9AO75110 1047 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 RARBP10826 455 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 CCL5P13501 91 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 KCNA2P16389 499 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 NEDD9Q14511 834 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 CALCRLQ16602 461 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 FOXD4L6Q3SYB3 417 aaPredicted RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 GJC2Q5T442 439 aaPredicted RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 ANO1Q5XXA6 986 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 FOXD4L3Q6VB84 417 aaPredicted RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 GIMAP8Q8ND71 665 aaPredicted RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 ETNPPLQ8TBG4 499 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 KCNMB3Q9NPA1 279 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 PAK6Q9NQU5 681 aaPredicted RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 CHMP5Q9NZZ3 219 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 GNEQ9Y223 722 aaKnown RBP19.86■□□□□ 0.77
LINC00271-201ENST00000421378 ATP6V1DQ9Y5K8 247 aa19.86■□□□□ 0.77
LINC00271-201ENST00000421378 TBX3O15119 743 aa19.85■□□□□ 0.77
LINC00271-201ENST00000421378 DUSP11O75319 330 aaKnown RBP19.85■□□□□ 0.77
LINC00271-201ENST00000421378 COL13A1Q5TAT6 717 aaPredicted RBP19.85■□□□□ 0.77
LINC00271-201ENST00000421378 TLK2Q86UE8 772 aa19.85■□□□□ 0.77
LINC00271-201ENST00000421378 COPS5Q92905 334 aa19.85■□□□□ 0.77
LINC00271-201ENST00000421378 UIMC1Q96RL1 719 aa19.85■□□□□ 0.77
LINC00271-201ENST00000421378 SDF4Q9BRK5 362 aa19.85■□□□□ 0.77
LINC00271-201ENST00000421378 MARCH6O60337 910 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 GGPS1O95749 300 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 GH1P01241 217 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 PTGS1P23219 599 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 ITGB3BPQ13352 177 aaPredicted RBP19.84■□□□□ 0.77
LINC00271-201ENST00000421378 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
LINC00271-201ENST00000421378 SLFN12Q8IYM2 578 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 SLC5A5Q92911 643 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 FAM20AQ96MK3 541 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 ZNF396Q96N95 335 aaPredicted RBP19.84■□□□□ 0.77
LINC00271-201ENST00000421378 FTOQ9C0B1 505 aaKnown RBP eCLIP19.84■□□□□ 0.77
LINC00271-201ENST00000421378 TBC1D22BQ9NU19 505 aa19.84■□□□□ 0.77
LINC00271-201ENST00000421378 FARP2O94887 1054 aaPredicted RBP19.83■□□□□ 0.77
LINC00271-201ENST00000421378 PTGDRQ13258 359 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 SF3A1Q15459 793 aaKnown RBP19.83■□□□□ 0.77
LINC00271-201ENST00000421378 LRCH2Q5VUJ6 765 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 METTL7BQ6UX53 244 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms