RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NR5A1Q13285 461 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 ART3Q13508 389 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
CLCN4-203ENST00000421085 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
CLCN4-203ENST00000421085 CAPN9O14815 690 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 TNNC2P02585 160 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 AOC3Q16853 763 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 HIPK4Q8NE63 616 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 TRAIPQ9BWF2 469 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 ODR4Q5SWX8 454 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 G3BP2Q9UN86 482 aaKnown RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 SPAG7O75391 227 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 CDC25AP30304 524 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 PCDHB4Q9Y5E5 795 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 GYG2O15488 501 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 GLE1Q53GS7 698 aaKnown RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 MAP7D3Q8IWC1 876 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 AK8Q96MA6 479 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 FIS1Q9Y3D6 152 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-203ENST00000421085 BCAMP50895 628 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 FAM186BQ8IYM0 893 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 MED10Q9BTT4 135 aa13.37□□□□□ -0.27
CLCN4-203ENST00000421085 A0A0G2JND7 137 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 GMNCA6NCL1 334 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 BPIFB4P59827 614 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 DYNLT1P63172 113 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 DBNLQ9UJU6 430 aaKnown RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 A6NJR5 290 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 DMP1Q13316 513 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 SERPINI1Q99574 410 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 PTPRTO14522 1441 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 CLIC2O15247 247 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 TRIM11Q96F44 468 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 FGFR1OP2Q9NVK5 253 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 KRT1P04264 644 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 CCDC68Q9H2F9 335 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 RANBP1P43487 201 aa13.36□□□□□ -0.27
CLCN4-203ENST00000421085 MAGOHP61326 146 aaKnown RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-203ENST00000421085 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 FGGP02679 453 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 CCNE1P24864 410 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 GRAMD4Q6IC98 578 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 NRBF2Q96F24 287 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 KRT82Q9NSB4 513 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 ZBTB22O15209 634 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 SORBS3O60504 671 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
CLCN4-203ENST00000421085 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 TEKT3Q9BXF9 490 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 MIS12Q9H081 205 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 KIF1CO43896 1103 aaKnown RBP13.35□□□□□ -0.27
CLCN4-203ENST00000421085 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
CLCN4-203ENST00000421085 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 PALMO75781 387 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 CHGBP05060 677 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 ACTN1P12814 892 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 GYG1P46976 350 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 FAM47EQ6ZV65 393 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 ABHD10Q9NUJ1 306 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 MYL1P05976 194 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 DYNC1I2Q13409 638 aaKnown RBP13.35□□□□□ -0.27
CLCN4-203ENST00000421085 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
CLCN4-203ENST00000421085 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
CLCN4-203ENST00000421085 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms