RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
NFE4-201ENST00000420058 ESR2Q92731 530 aa16.64■□□□□ 0.25
NFE4-201ENST00000420058 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
NFE4-201ENST00000420058 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
NFE4-201ENST00000420058 KDM4AO75164 1064 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 PPFIA4O75335 1185 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 LGR5O75473 907 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 HSD17B4P51659 736 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 HSDL1Q3SXM5 330 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 FBXO11Q86XK2 927 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 MCF2L2Q86YR7 1114 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
NFE4-201ENST00000420058 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
NFE4-201ENST00000420058 C16orf70Q9BSU1 422 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
NFE4-201ENST00000420058 BCAS3Q9H6U6 928 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
NFE4-201ENST00000420058 HCN4Q9Y3Q4 1203 aa16.63■□□□□ 0.25
NFE4-201ENST00000420058 EFCAB14O75071 495 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 IL9P15248 144 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 KCNA5P22460 613 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 HOXC8P31273 242 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 CELF3Q5SZQ8 465 aaKnown RBP16.62■□□□□ 0.25
NFE4-201ENST00000420058 STOX1Q6ZVD7 989 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 SERINC5Q86VE9 423 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 VSIG10LQ86VR7 867 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 DHX37Q8IY37 1157 aaKnown RBP16.62■□□□□ 0.25
NFE4-201ENST00000420058 GJD3Q8N144 294 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
NFE4-201ENST00000420058 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 INSL6Q9Y581 213 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
NFE4-201ENST00000420058 MYH7BA7E2Y1 1941 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 B4E1Z4 1266 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 SORBS3O60504 671 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 SDSP20132 328 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
NFE4-201ENST00000420058 ASPRV1Q53RT3 343 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
NFE4-201ENST00000420058 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
NFE4-201ENST00000420058 GRXCR2A6NFK2 248 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 ZNF213O14771 459 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 CFBP00751 764 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 FBXO22Q8NEZ5 403 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 MRPL38Q96DV4 380 aaKnown RBP16.6■□□□□ 0.25
NFE4-201ENST00000420058 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
NFE4-201ENST00000420058 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
NFE4-201ENST00000420058 SIP14410 1827 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 MICAL3Q7RTP6 2002 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 PARP1P09874 1014 aaKnown RBP16.59■□□□□ 0.25
NFE4-201ENST00000420058 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 EPC2Q52LR7 807 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 CCDC178Q5BJE1 867 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
NFE4-201ENST00000420058 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 MYOCDQ8IZQ8 938 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 TOP1MTQ969P6 601 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
NFE4-201ENST00000420058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.58■□□□□ 0.24
NFE4-201ENST00000420058 POTEB3A0JP26 581 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 TREHO43280 583 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 GGPS1O95749 300 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
NFE4-201ENST00000420058 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.24
NFE4-201ENST00000420058 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.24
NFE4-201ENST00000420058 THPOP40225 353 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 NT5C2P49902 561 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 PGM5Q15124 567 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 POTEBQ6S5H4 581 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
NFE4-201ENST00000420058 EMSYQ7Z589 1322 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 PRR33A8MZF0 331 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 H3BNC9 293 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 H3BQ06 376 aaPredicted RBP16.57■□□□□ 0.24
NFE4-201ENST00000420058 AMHP03971 560 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 TGFB3P10600 412 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 SEC23AQ15436 765 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
NFE4-201ENST00000420058 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
NFE4-201ENST00000420058 MAD2L2Q9UI95 211 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 TELO2Q9Y4R8 837 aa16.57■□□□□ 0.24
NFE4-201ENST00000420058 BAZ2BQ9UIF8 2168 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms