RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
RARA-205ENST00000420042 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
RARA-205ENST00000420042 GTF2IRD1Q9UHL9 959 aa17.45■□□□□ 0.38
RARA-205ENST00000420042 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
RARA-205ENST00000420042 STAM2O75886 525 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 F2P00734 622 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 LIFRP42702 1097 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 SP2Q02086 613 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 HSDL1Q3SXM5 330 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
RARA-205ENST00000420042 PCDHA11Q9Y5I1 949 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 COL6A3P12111 3177 aa17.44■□□□□ 0.38
RARA-205ENST00000420042 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 HAS3O00219 553 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 SELPP16109 830 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 RXRAP19793 462 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
RARA-205ENST00000420042 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
RARA-205ENST00000420042 GPKOWQ92917 476 aaPredicted RBP eCLIP17.43■□□□□ 0.38
RARA-205ENST00000420042 RTEL1Q9NZ71 1219 aa17.43■□□□□ 0.38
RARA-205ENST00000420042 NOP56O00567 594 aaKnown RBP17.42■□□□□ 0.38
RARA-205ENST00000420042 PARNO95453 639 aaKnown RBP17.42■□□□□ 0.38
RARA-205ENST00000420042 HOXD8P13378 290 aaPredicted RBP17.42■□□□□ 0.38
RARA-205ENST00000420042 MYOGP15173 224 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 PTK7Q13308 1070 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 NEDD9Q14511 834 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 USP17L6PQ6QN14 398 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 LRRC8DQ7L1W4 858 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 PHOSPHO2Q8TCD6 241 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 INPP4AQ96PE3 977 aaPredicted RBP17.42■□□□□ 0.38
RARA-205ENST00000420042 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 SLC9A7Q96T83 725 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 FRMPD4Q14CM0 1322 aa17.42■□□□□ 0.38
RARA-205ENST00000420042 SPATA31C2B4DYI2 1134 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 PIK3CDO00329 1044 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 FIBPO43427 364 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 CKBP12277 381 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 IGFBP4P22692 258 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 ICAM3P32942 547 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 MRPS9P82933 396 aaKnown RBP17.41■□□□□ 0.38
RARA-205ENST00000420042 RBL2Q08999 1139 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 PCNX4Q63HM2 1172 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 XRRA1Q6P2D8 792 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 RAB11FIP4Q86YS3 637 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 CCDC82Q8N4S0 544 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
RARA-205ENST00000420042 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 C16orf70Q9BSU1 422 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 COL25A1Q9BXS0 654 aaPredicted RBP17.41■□□□□ 0.38
RARA-205ENST00000420042 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
RARA-205ENST00000420042 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 H3BRB1 525 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 MEIS2O14770 477 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 KCNJ6P48051 423 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
RARA-205ENST00000420042 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
RARA-205ENST00000420042 METTL7BQ6UX53 244 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 NLRX1Q86UT6 975 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
RARA-205ENST00000420042 TUT1Q9H6E5 874 aaKnown RBP17.4■□□□□ 0.38
RARA-205ENST00000420042 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
RARA-205ENST00000420042 C17orf102A2RUQ5 167 aa17.39■□□□□ 0.37
RARA-205ENST00000420042 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
RARA-205ENST00000420042 CYFIP1Q7L576 1253 aa17.39■□□□□ 0.37
RARA-205ENST00000420042 SGMS1Q86VZ5 419 aa17.39■□□□□ 0.37
RARA-205ENST00000420042 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
RARA-205ENST00000420042 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 CDC45O75419 566 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 LGALS2P05162 132 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 CA3P07451 260 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 ADGRE1Q14246 886 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 CNKSR3Q6P9H4 555 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
RARA-205ENST00000420042 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 NBNO60934 754 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 SP4Q02446 784 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 KRT32Q14532 448 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 GPNMBQ14956 572 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
RARA-205ENST00000420042 GIMAP8Q8ND71 665 aaPredicted RBP17.37■□□□□ 0.37
RARA-205ENST00000420042 ATP6V0A1Q93050 837 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 CDHR1Q96JP9 859 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 GPR20Q99678 358 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 SENP7Q9BQF6 1050 aa17.37■□□□□ 0.37
RARA-205ENST00000420042 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
RARA-205ENST00000420042 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms