RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 IFNAR1P17181 557 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 ITGB5P18084 799 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 ANAPC15P60006 121 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 FGD1P98174 961 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 NBPF20Q3BBV1 942 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 LRIT3Q3SXY7 679 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 KCNV1Q6PIU1 500 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 CUL5Q93034 780 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 VWCEQ96DN2 955 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 ZNF274Q96GC6 653 aaPredicted RBP23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 LARP6Q9BRS8 491 aaKnown RBP23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 PCDHA6Q9UN73 950 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 PCDHA8Q9Y5H6 950 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 DOCK5Q9H7D0 1870 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 UMODL1Q5DID0 1318 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 CCDC196A0A1B0GTZ2 297 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 HAS3O00219 553 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 SCG2P13521 617 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 LAMC2Q13753 1193 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 C9orf50Q5SZB4 431 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 TEX2Q8IWB9 1127 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 PHKBQ93100 1093 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 RTEL1Q9NZ71 1219 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 UBIAD1Q9Y5Z9 338 aa23.69■■□□□ 1.38
PKNOX1-202ENST00000418336 GGPS1O95749 300 aa23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 NAPAP54920 295 aa23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 NFRKBQ6P4R8 1299 aa23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 C16orf59Q7L2K0 433 aa23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 DHX37Q8IY37 1157 aaKnown RBP23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 LBHD1Q9BQE6 289 aaPredicted RBP23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 TRMT13Q9NUP7 481 aaKnown RBP23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 NAP1L2Q9ULW6 460 aaPredicted RBP23.68■■□□□ 1.38
PKNOX1-202ENST00000418336 ESYT2A0FGR8 921 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 SMCO2A6NFE2 343 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 FIBPO43427 364 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 PPFIA3O75145 1194 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 F2P00734 622 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 RAG1P15918 1043 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 CCT2P78371 535 aaKnown RBP23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 SHHQ15465 462 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 MFSD5Q6N075 450 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 SESTD1Q86VW0 696 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 CRYGNQ8WXF5 182 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 LRCH3Q96II8 777 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 PGBD1Q96JS3 809 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 NOC4LQ9BVI4 516 aaKnown RBP23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 ZMYND12Q9H0C1 365 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 PDRG1Q9NUG6 133 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 TMEM260Q9NX78 707 aa23.67■■□□□ 1.38
PKNOX1-202ENST00000418336 SORBS3O60504 671 aa23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 ATP9AO75110 1047 aa23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 ADCY7P51828 1080 aa23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 BRDTQ58F21 947 aaPredicted RBP23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 C16orf70Q9BSU1 422 aa23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 RNF26Q9BY78 433 aaPredicted RBP23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 WNT8AQ9H1J5 351 aa23.66■■□□□ 1.38
PKNOX1-202ENST00000418336 TLR3O15455 904 aaKnown RBP23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 ZNF286BP0CG31 522 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 KCNA2P16389 499 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 PTPN11Q06124 597 aaPredicted RBP23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 HIC1Q14526 733 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 DGKDQ16760 1214 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 GPRASP2Q96D09 838 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 SPATA33Q96N06 139 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 SENP7Q9BQF6 1050 aa23.65■■□□□ 1.38
PKNOX1-202ENST00000418336 EDIL3O43854 480 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 PPFIA4O75335 1185 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 FPGSQ05932 587 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 GNPTABQ3T906 1256 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 METTL7BQ6UX53 244 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 GPR20Q99678 358 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 ANO3Q9BYT9 981 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 TPCN1Q9ULQ1 816 aa23.64■■□□□ 1.37
PKNOX1-202ENST00000418336 SPDYE3A6NKU9 549 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 CYP2C18P33260 490 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 SREBF1P36956 1147 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 SCRN1Q12765 414 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 CYFIP1Q7L576 1253 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 CYP2W1Q8TAV3 490 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 PPP1R12CQ9BZL4 782 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 JADE2Q9NQC1 790 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 CDH23Q9H251 3354 aa23.63■■□□□ 1.37
PKNOX1-202ENST00000418336 CYP2C9P11712 490 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 CSF2RAP15509 400 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 HOXC8P31273 242 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 PSEN2P49810 448 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 AP3B2Q13367 1082 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 GDF6Q6KF10 455 aaPredicted RBP23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 SLC26A6Q9BXS9 759 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 HIPK3Q9H422 1215 aa23.62■■□□□ 1.37
PKNOX1-202ENST00000418336 FOSP01100 380 aaPredicted RBP23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 AK2P54819 239 aa23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 NEDD9Q14511 834 aa23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 NPY5RQ15761 445 aa23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 RASIP1Q5U651 963 aa23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 NLRX1Q86UT6 975 aa23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 DHX38Q92620 1227 aaKnown RBP23.61■■□□□ 1.37
PKNOX1-202ENST00000418336 TANC1Q9C0D5 1861 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 CTDNEP1O95476 244 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms