RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 TM6SF1Q9BZW5 370 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 PLA2R1Q13018 1463 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CCT8L1PA6NM43 557 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 GUCY1B2O75343 617 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 FRA10AC1Q70Z53 315 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 OSBPL5Q9H0X9 879 aaPredicted RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 H7C1D1 291 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 S100A5P33763 92 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 PLTPP55058 493 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 MYBPC2Q14324 1141 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 SULT6B1Q6IMI4 303 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 ADCK1Q86TW2 530 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 GORASP1Q9BQQ3 440 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 MTMR6Q9Y217 621 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 LRPAP1P30533 357 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 EHHADHQ08426 723 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 PDE4DQ08499 809 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 TBC1D10BQ4KMP7 808 aaPredicted RBP11.12□□□□□ -0.63
SATB1-204ENST00000417717 LRRC31Q6UY01 552 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 TRPM8Q7Z2W7 1104 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 SH3GLB1Q9Y371 365 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
SATB1-204ENST00000417717 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
SATB1-204ENST00000417717 RASSF9O75901 435 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 H2AFZP0C0S5 128 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
SATB1-204ENST00000417717 RPS6KB1P23443 525 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 GNAQP50148 359 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 MTTPP55157 894 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 FBXO31Q5XUX0 539 aaPredicted RBP11.12□□□□□ -0.63
SATB1-204ENST00000417717 H2AFVQ71UI9 128 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 NELFBQ8WX92 580 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 SEC16BQ96JE7 1060 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 KDM5CP41229 1560 aa11.12□□□□□ -0.63
SATB1-204ENST00000417717 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 KCNJ18B7U540 433 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 KPNA4O00629 521 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 INHBAP08476 426 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 MMP14P50281 582 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 PKP1Q13835 747 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 KCNJ12Q14500 433 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 C15orf41Q9Y2V0 281 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 RIMS2Q9UQ26 1411 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 EFCAB6Q5THR3 1501 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 RNF103-CHMP3A0A140T963 221 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 FAM13AO94988 1023 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CMA1P23946 247 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 PLA2G4AP47712 749 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 HAND2P61296 217 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CYTH1Q15438 398 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CCDC153Q494R4 210 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 ARHGEF25Q86VW2 580 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CCT7Q99832 543 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 DCDC2Q9UHG0 476 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 FBXO9Q9UK97 447 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 POC1B-GALNT4F8VUJ3 575 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 GSTA1P08263 222 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 EMC3Q9P0I2 261 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 ATXN10Q9UBB4 475 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 MBD2Q9UBB5 411 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 TAF4O00268 1085 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CCDC22O60826 627 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 UBTFL6P0CB48 400 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 MARK3P27448 753 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CENPUQ71F23 418 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CYFIP2Q96F07 1278 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 CUEDC2Q9H467 287 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
SATB1-204ENST00000417717 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 TMCO1Q9UM00 188 aa11.11□□□□□ -0.63
SATB1-204ENST00000417717 USP15Q9Y4E8 981 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms