RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 ETNPPLQ8TBG4 499 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
SYNC-203ENST00000417633 CDHR1Q96JP9 859 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 FAM20AQ96MK3 541 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 FTOQ9C0B1 505 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNC-203ENST00000417633 SCAND2PQ9GZW5 306 aaPredicted RBP13.11□□□□□ -0.31
SYNC-203ENST00000417633 TMEM60Q9H2L4 133 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 NRBP1Q9UHY1 535 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 MSH4O15457 936 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 FIBPO43427 364 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 ADCY3O60266 1144 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
SYNC-203ENST00000417633 ARP10275 920 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 PRPHP41219 470 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 MTMR1Q13613 665 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 MFSD14CQ5VZR4 134 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
SYNC-203ENST00000417633 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 RAET1EQ8TD07 263 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 LEO1Q8WVC0 666 aaPredicted RBP13.1□□□□□ -0.31
SYNC-203ENST00000417633 TRIB2Q92519 343 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 HAS1Q92839 578 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
SYNC-203ENST00000417633 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 SPTLC2O15270 562 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 PPP6R2O75170 966 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 OR52Z1P0C646 297 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
SYNC-203ENST00000417633 CYP2C19P33261 490 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 LBX1P52954 281 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 CEBPZQ03701 1054 aaKnown RBP13.09□□□□□ -0.31
SYNC-203ENST00000417633 STK38Q15208 465 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 CALCRLQ16602 461 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
SYNC-203ENST00000417633 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
SYNC-203ENST00000417633 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
SYNC-203ENST00000417633 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 ATP9AO75110 1047 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 PSMD10O75832 226 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 HMGCRP04035 888 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 KCNA2P16389 499 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 SCFD2Q8WU76 684 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 SPATA32Q96LK8 384 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 RIT2Q99578 217 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 PDGFCQ9NRA1 345 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 DDX41Q9UJV9 622 aaKnown RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 SRPRBQ9Y5M8 271 aaKnown RBP13.08□□□□□ -0.32
SYNC-203ENST00000417633 NFASCO94856 1347 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 ELP1O95163 1332 aa13.08□□□□□ -0.32
SYNC-203ENST00000417633 CYBAP13498 195 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 ELNP15502 786 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 GRK4P32298 578 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
SYNC-203ENST00000417633 SP2Q02086 613 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
SYNC-203ENST00000417633 NEDD9Q14511 834 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 PDIA5Q14554 519 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 IL17AQ16552 155 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 PRAMEF19Q5SWL8 479 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 DTHD1Q6ZMT9 781 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 CTU1Q7Z7A3 348 aaKnown RBP13.07□□□□□ -0.32
SYNC-203ENST00000417633 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
SYNC-203ENST00000417633 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 PTCH2Q9Y6C5 1203 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 MRVI1Q9Y6F6 885 aa13.07□□□□□ -0.32
SYNC-203ENST00000417633 NKRFO15226 690 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYNC-203ENST00000417633 MARCH6O60337 910 aa13.06□□□□□ -0.32
SYNC-203ENST00000417633 ARIH2O95376 493 aa13.06□□□□□ -0.32
SYNC-203ENST00000417633 TXNP10599 105 aaKnown RBP13.06□□□□□ -0.32
SYNC-203ENST00000417633 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
SYNC-203ENST00000417633 TXKP42681 527 aa13.06□□□□□ -0.32
SYNC-203ENST00000417633 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
SYNC-203ENST00000417633 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
SYNC-203ENST00000417633 PKN2Q16513 984 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms