RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 SPATA33Q96N06 139 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 MYL10Q9BUA6 226 aa18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 MAP3K20Q9NYL2 800 aaKnown RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.48
RHBDF1-202ENST00000417043 DOCK5Q9H7D0 1870 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 MUC3AQ02505 3323 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 PNMA6FA0A0J9YX94 578 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 HAS3O00219 553 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 GGPS1O95749 300 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 CKBP12277 381 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 TCTN1Q2MV58 587 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 TJAP1Q5JTD0 557 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 MICALL1Q8N3F8 863 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 CAGE1Q8TC20 777 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
RHBDF1-202ENST00000417043 EPOPA6NHQ4 379 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 NBNO60934 754 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 F2P00734 622 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 SELPP16109 830 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 UBA1P22314 1058 aaKnown RBP18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 SART3Q15020 963 aaKnown RBP18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 LRRC8DQ7L1W4 858 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 SPRED2Q7Z698 418 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 HERC6Q8IVU3 1022 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
RHBDF1-202ENST00000417043 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 PPFIA4O75335 1185 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 CCND2P30279 289 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 MRPS9P82933 396 aaKnown RBP18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 KRT40Q6A162 431 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 SAMD3Q8N6K7 520 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 CCDC155Q8N6L0 562 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 SYMPKQ92797 1274 aaKnown RBP18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 KATNAL1Q9BW62 490 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 LY9Q9HBG7 655 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
RHBDF1-202ENST00000417043 HOXD8P13378 290 aaPredicted RBP18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 TAP1Q03518 808 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 TRIM71Q2Q1W2 868 aaKnown RBP18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 ZNF618Q5T7W0 954 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 KCNV1Q6PIU1 500 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 ZNF654Q8IZM8 581 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 C16orf70Q9BSU1 422 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 MLXIPQ9HAP2 919 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 THEGQ9P2T0 379 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 TELO2Q9Y4R8 837 aa18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 TCF20Q9UGU0 1960 aaKnown RBP18.04■□□□□ 0.48
RHBDF1-202ENST00000417043 LCHNA4D1U4 455 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 TGFB3P10600 412 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 RXRAP19793 462 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 DEFB103AP81534 67 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 TRAF1Q13077 416 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 PTK7Q13308 1070 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 MBTPS1Q14703 1052 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 TRAF7Q6Q0C0 670 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 USP17L6PQ6QN14 398 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 CMTR1Q8N1G2 835 aaKnown RBP18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 ARNTL2Q8WYA1 636 aa18.03■□□□□ 0.48
RHBDF1-202ENST00000417043 KIF28PB7ZC32 967 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 PRC1O43663 620 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 TLL1O43897 1013 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 BAIAP3O94812 1187 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 PLEKHA8P1O95397 391 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 KCNJ6P48051 423 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 RBL2Q08999 1139 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 SEMA3FQ13275 785 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 ATXN2LQ8WWM7 1075 aaKnown RBP18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 ASB2Q96Q27 587 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 MTCH2Q9Y6C9 303 aa18.02■□□□□ 0.48
RHBDF1-202ENST00000417043 CXCL10P02778 98 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 CNKSR3Q6P9H4 555 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 NFXL1Q6ZNB6 911 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 CYFIP1Q7L576 1253 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 SRBD1Q8N5C6 995 aaKnown RBP18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 CTCFLQ8NI51 663 aaPredicted RBP18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 LRRC2Q9BYS8 371 aa18.01■□□□□ 0.47
RHBDF1-202ENST00000417043 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 SPATA31C2B4DYI2 1134 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 H3BRB1 525 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
RHBDF1-202ENST00000417043 MEIS2O14770 477 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 SLC27A2O14975 620 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 DDAH1O94760 285 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 LGALS2P05162 132 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 THPOP40225 353 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 MRPS5P82675 430 aaKnown RBP18■□□□□ 0.47
RHBDF1-202ENST00000417043 TFF2Q03403 129 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 FAM117BQ6P1L5 589 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 SMARCC2Q8TAQ2 1214 aa18■□□□□ 0.47
RHBDF1-202ENST00000417043 INPP4AQ96PE3 977 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms