RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GGPS1O95749 300 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 TGFB3P10600 412 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
PAF1-202ENST00000416728 WDR5P61964 334 aaKnown RBP16.72■□□□□ 0.27
PAF1-202ENST00000416728 TAP1Q03518 808 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 TROAPQ12815 778 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 PTK7Q13308 1070 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 CNKSR3Q6P9H4 555 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 CATIPQ7Z7H3 387 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 CHD9Q3L8U1 2897 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
PAF1-202ENST00000416728 GBF1Q92538 1859 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 TANC1Q9C0D5 1861 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 RFXAPO00287 272 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 SGSM2O43147 1006 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 CYTH3O43739 400 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 CXCL10P02778 98 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 UBA1P22314 1058 aaKnown RBP16.71■□□□□ 0.27
PAF1-202ENST00000416728 GPNMBQ14956 572 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 SKIV2LQ15477 1246 aaKnown RBP16.71■□□□□ 0.27
PAF1-202ENST00000416728 ARNTL2Q8WYA1 636 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 MLXIPQ9HAP2 919 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
PAF1-202ENST00000416728 NBNO60934 754 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 POU3F3P20264 500 aaPredicted RBP16.7■□□□□ 0.26
PAF1-202ENST00000416728 GNPTABQ3T906 1256 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
PAF1-202ENST00000416728 ZBED2Q9BTP6 218 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 MTCH2Q9Y6C9 303 aa16.7■□□□□ 0.26
PAF1-202ENST00000416728 KIAA1217Q5T5P2 1943 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 ABHD14A-ACY1A0A1B0GW23 586 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
PAF1-202ENST00000416728 SP2Q02086 613 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 ZNF618Q5T7W0 954 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 GPKOWQ92917 476 aaPredicted RBP eCLIP16.69■□□□□ 0.26
PAF1-202ENST00000416728 MYH6P13533 1939 aa16.69■□□□□ 0.26
PAF1-202ENST00000416728 EFCAB14O75071 495 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 STAM2O75886 525 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 ANTXR2P58335 489 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 DEFB103AP81534 67 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 AAK1Q2M2I8 961 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 TRIM71Q2Q1W2 868 aaKnown RBP16.68■□□□□ 0.26
PAF1-202ENST00000416728 TMCO2Q7Z6W1 182 aaPredicted RBP16.68■□□□□ 0.26
PAF1-202ENST00000416728 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
PAF1-202ENST00000416728 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
PAF1-202ENST00000416728 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 MAP4K1Q92918 833 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 WNT8BQ93098 351 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 UHRF1Q96T88 793 aaPredicted RBP16.68■□□□□ 0.26
PAF1-202ENST00000416728 C16orf70Q9BSU1 422 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
PAF1-202ENST00000416728 NOP56O00567 594 aaKnown RBP16.67■□□□□ 0.26
PAF1-202ENST00000416728 KIF5BP33176 963 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 IKBKEQ14164 716 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
PAF1-202ENST00000416728 FRMPD4Q14CM0 1322 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 EMSYQ7Z589 1322 aa16.67■□□□□ 0.26
PAF1-202ENST00000416728 C17orf102A2RUQ5 167 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 LCHNA4D1U4 455 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 H3BRB1 525 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 DDAH1O94760 285 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 GJB5O95377 273 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 LGALS2P05162 132 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 ICAM3P32942 547 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 THPOP40225 353 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
PAF1-202ENST00000416728 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
PAF1-202ENST00000416728 TFF2Q03403 129 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 NEDD9Q14511 834 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 HIC1Q14526 733 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 MBTPS1Q14703 1052 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 TCTN1Q2MV58 587 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 KRT40Q6A162 431 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 SERINC5Q86VE9 423 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 TET1Q8NFU7 2136 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 CUL5Q93034 780 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
PAF1-202ENST00000416728 INPP4AQ96PE3 977 aaPredicted RBP16.66■□□□□ 0.26
PAF1-202ENST00000416728 MAP3K14Q99558 947 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
PAF1-202ENST00000416728 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
PAF1-202ENST00000416728 RSPH10B2B2RC85 870 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 FIBPO43427 364 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 LGR5O75473 907 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 RSPH10BP0C881 870 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 GRB10Q13322 594 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 METTL7BQ6UX53 244 aa16.65■□□□□ 0.26
PAF1-202ENST00000416728 SPRED2Q7Z698 418 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms