RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 HMG20BQ9P0W2 317 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 CNTN3Q9P232 1028 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 EGFL7Q9UHF1 273 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 AGTPBP1Q9UPW5 1226 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 SLC45A1Q9Y2W3 748 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 COL2A1P02458 1487 aaPredicted RBP8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
THUMPD3-202ENST00000416603 CCER2I3L3R5 266 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 FZD6O60353 706 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 ADAM23O75077 832 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 GNAI2P04899 355 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 RHBDL3P58872 404 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 SPP2Q13103 211 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 G3BP1Q13283 466 aaKnown RBP eCLIP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 OS9Q13438 667 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 ADGRE1Q14246 886 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 MBTPS1Q14703 1052 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 SF3A1Q15459 793 aaKnown RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 TREML2Q5T2D2 321 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 GLYCTKQ8IVS8 523 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 C1orf127Q8N9H9 656 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 GIPC2Q8TF65 315 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 DEFB118Q96PH6 123 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 OSBPL5Q9H0X9 879 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 LRP2BPQ9P2M1 347 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 TNNQ9UQP3 1299 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 NR2E3Q9Y5X4 410 aa8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.09□□□□□ -1.11
THUMPD3-202ENST00000416603 NAV1Q8NEY1 1877 aa8.09□□□□□ -1.12
THUMPD3-202ENST00000416603 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 MYH8P13535 1937 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 IPO8O15397 1037 aaKnown RBP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 ICMTO60725 284 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 SGPL1O95470 568 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 TFRCP02786 760 aaKnown RBP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 UQCRFS1P1P0C7P4 283 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 CES1P23141 567 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 MCAMP43121 646 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 USP5P45974 858 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 HMGCS2P54868 508 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 NRG1Q02297 640 aaPredicted RBP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 EHHADHQ08426 723 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 PABPC4Q13310 644 aaKnown RBP eCLIP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 MTX1Q13505 466 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 FAM110CQ1W6H9 321 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 TTC39AQ5SRH9 613 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 CACTIN-AS1Q8N1I8 211 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 SH3RF3Q8TEJ3 882 aaPredicted RBP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 ZNF384Q8TF68 577 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 ARHGAP45Q92619 1136 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 NSUN4Q96CB9 384 aaKnown RBP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 AS3MTQ9HBK9 375 aa8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 AATFQ9NY61 560 aaKnown RBP eCLIP8.08□□□□□ -1.12
THUMPD3-202ENST00000416603 PNMA6EA0A0J9YXQ4 647 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 MAP4K4O95819 1239 aaPredicted RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 TRIM27P14373 513 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 CAP2P40123 477 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 NAA16Q6N069 864 aaPredicted RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 ATF7IPQ6VMQ6 1270 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 MAPKAPK5Q8IW41 473 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 CEP120Q8N960 986 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 HERC5Q9UII4 1024 aaKnown RBP8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 SALL4Q9UJQ4 1053 aa8.07□□□□□ -1.12
THUMPD3-202ENST00000416603 BCAR3O75815 825 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 BAG3O95817 575 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 ACPPP15309 386 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 GCLCP48506 637 aaPredicted RBP8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 RRP1BQ14684 758 aaKnown RBP8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 CCDC158Q5M9N0 1113 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 GJD3Q8N144 294 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 SNX29Q8TEQ0 813 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 DBNDD2Q9BQY9 259 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 ASCC2Q9H1I8 757 aaPredicted RBP8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 SRA1Q9HD15 236 aaKnown RBP8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 TPSG1Q9NRR2 321 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 TMOD4Q9NZQ9 345 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 PI4KBQ9UBF8 816 aa8.06□□□□□ -1.12
THUMPD3-202ENST00000416603 FLT1P17948 1338 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 PHACTR2O75167 634 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 TNFRSF21O75509 655 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 HMGCRP04035 888 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 ASNSP08243 561 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 CYP2B6P20813 491 aa8.05□□□□□ -1.12
THUMPD3-202ENST00000416603 CDC27P30260 824 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms