RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PLCG2P16885 1265 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 ATP2B4P23634 1241 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 EHHADHQ08426 723 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 COASYQ13057 564 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 PDIA5Q14554 519 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 C15orf52Q6ZUT6 534 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 CCDC84Q86UT8 332 aaPredicted RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 DNAJC19Q96DA6 116 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 TMEM119Q4V9L6 283 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 SND1Q7KZF4 910 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00475-202ENST00000416438 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 MXD3Q9BW11 206 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 TRIM34Q9BYJ4 488 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
LINC00475-202ENST00000416438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
LINC00475-202ENST00000416438 LCA5LO95447 670 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
LINC00475-202ENST00000416438 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
LINC00475-202ENST00000416438 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 MMGT1Q8N4V1 131 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 ANKRD65E5RJM6 399 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 MYO1CO00159 1063 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 RAD21O60216 631 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 TLR2O60603 784 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 ARID5AQ03989 594 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 ORC2Q13416 577 aaPredicted RBP16.29■□□□□ 0.2
LINC00475-202ENST00000416438 ASPRV1Q53RT3 343 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 GOLGA6L1Q8N7Z2 621 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
LINC00475-202ENST00000416438 TSG101Q99816 390 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 TLR10Q9BXR5 811 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 GAKO14976 1311 aa16.29■□□□□ 0.2
LINC00475-202ENST00000416438 NOL4O94818 638 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 GABPAQ06546 454 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
LINC00475-202ENST00000416438 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 PNMA6FA0A0J9YX94 578 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
LINC00475-202ENST00000416438 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 FAM26FQ5R3K3 315 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 CCDC181Q5TID7 509 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 KLHDC7AQ5VTJ3 777 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 SRLQ86TD4 932 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 ALS2CR12Q96Q35 445 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 RRP15Q9Y3B9 282 aaKnown RBP16.28■□□□□ 0.2
LINC00475-202ENST00000416438 COL4A3BPQ9Y5P4 624 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 MYH10P35580 1976 aa16.28■□□□□ 0.2
LINC00475-202ENST00000416438 MPHOSPH10O00566 681 aaKnown RBP16.27■□□□□ 0.2
LINC00475-202ENST00000416438 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.2
LINC00475-202ENST00000416438 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 IQCDQ96DY2 449 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 LSM14BQ9BX40 385 aaKnown RBP16.27■□□□□ 0.2
LINC00475-202ENST00000416438 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 CLK2P49760 499 aaKnown RBP16.27■□□□□ 0.2
LINC00475-202ENST00000416438 PSMD2Q13200 908 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 CCDC70Q6NSX1 233 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
LINC00475-202ENST00000416438 RBM12Q9NTZ6 932 aaKnown RBP16.27■□□□□ 0.2
LINC00475-202ENST00000416438 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
LINC00475-202ENST00000416438 POTEB3A0JP26 581 aa16.26■□□□□ 0.19
LINC00475-202ENST00000416438 POTECB2RU33 542 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms