RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 F2P00734 622 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 SP2Q02086 613 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 MFSD10Q14728 455 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 KIAA0753Q2KHM9 967 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 AFAP1L1Q8TED9 768 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 MLXIPQ9HAP2 919 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 GTF2IRD1Q9UHL9 959 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 SCN5AQ14524 2016 aa20.29■□□□□ 0.84
PDLIM2-208ENST00000416159 PIK3CDO00329 1044 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 UBA1P22314 1058 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 ICAM3P32942 547 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 HSDL1Q3SXM5 330 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 SYNE3Q6ZMZ3 975 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 SKAP1Q86WV1 359 aa20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 ZFP91Q96JP5 570 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 FTOQ9C0B1 505 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM2-208ENST00000416159 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 ZNF286BP0CG31 522 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 RXRAP19793 462 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 MRPS9P82933 396 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 COL9A3Q14050 684 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 NEDD9Q14511 834 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 XRRA1Q6P2D8 792 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 USP17L6PQ6QN14 398 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 FANCBQ8NB91 859 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 INPP4AQ96PE3 977 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 GAS2L1Q99501 681 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 LRRC2Q9BYS8 371 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 SLC28A3Q9HAS3 691 aa20.27■□□□□ 0.84
PDLIM2-208ENST00000416159 MEIS2O14770 477 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 SORBS3O60504 671 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 CDC45O75419 566 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 SELPP16109 830 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 ATP2A2P16615 1042 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 RBL2Q08999 1139 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 RTEL1Q9NZ71 1219 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 YBX2Q9Y2T7 364 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 PCDHA11Q9Y5I1 949 aa20.26■□□□□ 0.83
PDLIM2-208ENST00000416159 SPATA31C2B4DYI2 1134 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 FIBPO43427 364 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 RABGGTBP53611 331 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 PTK7Q13308 1070 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 TET1Q8NFU7 2136 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 PHOSPHO2Q8TCD6 241 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 DHX38Q92620 1227 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 SLC9A7Q96T83 725 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 C16orf70Q9BSU1 422 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 PSTPIP2Q9H939 334 aa20.25■□□□□ 0.83
PDLIM2-208ENST00000416159 GBF1Q92538 1859 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 TANC1Q9C0D5 1861 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 NOP56O00567 594 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 TMTC3Q6ZXV5 915 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 LRRC8DQ7L1W4 858 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 NLRX1Q86UT6 975 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 PRDM12Q9H4Q4 367 aa20.24■□□□□ 0.83
PDLIM2-208ENST00000416159 BAIAP3O94812 1187 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 CKBP12277 381 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 SEMA3FQ13275 785 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 KRT32Q14532 448 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 METTL7BQ6UX53 244 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 MICU3Q86XE3 530 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 CCDC82Q8N4S0 544 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 SENP7Q9BQF6 1050 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-208ENST00000416159 H3BRB1 525 aa20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 LGALS2P05162 132 aa20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 APOA5Q6Q788 366 aa20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 CYFIP1Q7L576 1253 aa20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 TUT1Q9H6E5 874 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 BCAS3Q9H6U6 928 aa20.22■□□□□ 0.83
PDLIM2-208ENST00000416159 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 CXCL10P02778 98 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 MYOGP15173 224 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 ZNF200P98182 395 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 GPNMBQ14956 572 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 TRIM71Q2Q1W2 868 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 GIMAP8Q8ND71 665 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 GPR20Q99678 358 aa20.21■□□□□ 0.83
PDLIM2-208ENST00000416159 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 C17orf102A2RUQ5 167 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 SPDYE3A6NKU9 549 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 HMGB1P09429 215 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 KCNJ6P48051 423 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms