RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 PLA2G4DQ86XP0 818 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 AP5M1Q9H0R1 490 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 FAM86B1E9PN63 330 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 DDX39AO00148 427 aaKnown RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 FIBPO43427 364 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 MARCH6O60337 910 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 MSCO60682 206 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 FAM86B2P0C5J1 330 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 C6orf222P0C671 652 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 ARP10275 920 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 BEX3Q00994 111 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 DHX37Q8IY37 1157 aaKnown RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 JADE2Q9NQC1 790 aa11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 PAK6Q9NQU5 681 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
HLA-DMB-257ENST00000414017 RBM47A0AV96 593 aaKnown RBP11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 STX6O43752 255 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 SGPL1O95470 568 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 GGPS1O95749 300 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 GH1P01241 217 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 GJB1P08034 283 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 CYP3A4P08684 503 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 EN2P19622 333 aaPredicted RBP11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 UBA1P22314 1058 aaKnown RBP11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 USP11P51784 963 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 SP2Q02086 613 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 NBR1Q14596 966 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 DUSP28Q4G0W2 176 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 GPRASP2Q96D09 838 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 MYH7BA7E2Y1 1941 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
HLA-DMB-257ENST00000414017 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 ATP9AO75110 1047 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 DUSP11O75319 330 aaKnown RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 MYL3P08590 195 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 MCM7P33993 719 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 ZNF174Q15697 407 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 LHX8Q68G74 356 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 CCDC62Q6P9F0 684 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 RNF180Q86T96 592 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 CRYGNQ8WXF5 182 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 GJA10Q969M2 543 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 SDF4Q9BRK5 362 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 AGO4Q9HCK5 861 aaKnown RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
HLA-DMB-257ENST00000414017 BRCA2P51587 3418 aa11.83□□□□□ -0.51
HLA-DMB-257ENST00000414017 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 MEIS1O00470 390 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 WNT7AO00755 349 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 SLC37A4O43826 429 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 EDIL3O43854 480 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 TGFB3P10600 412 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 ICAM3P32942 547 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 CIITAP33076 1130 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 GJA8P48165 433 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 NEDD9Q14511 834 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 LRRC41Q15345 812 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 TTC38Q5R3I4 469 aa11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 CELF3Q5SZQ8 465 aaKnown RBP11.83□□□□□ -0.52
HLA-DMB-257ENST00000414017 ARRDC4Q8NCT1 418 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms