RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PHAXQ9H814 394 aaKnown RBP4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 PCDHB10Q9UN67 800 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 KCNH1O95259 989 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 FPR2P25090 351 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 RPL11P62913 178 aaKnown RBP4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 DPTQ07507 201 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 INF2Q27J81 1249 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 USP39Q53GS9 565 aaKnown RBP4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 RIOX2Q8IUF8 465 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 TMEM209Q96SK2 561 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 BCL11AQ9H165 835 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 IKZF4Q9H2S9 585 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 AKT3Q9Y243 479 aa4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 TIMM13Q9Y5L4 95 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P2-201ENST00000411913 FOXS1O43638 330 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 PPFIA2O75334 1257 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 CHRNA2Q15822 529 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 TCTN3Q6NUS6 607 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 TEPPQ6URK8 271 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 RALYLQ86SE5 291 aaKnown RBP4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 COPS5Q92905 334 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 LRRC37BQ96QE4 947 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 LMF1Q96S06 567 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 WDR26Q9H7D7 661 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 SEC61A2Q9H9S3 476 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 ADAM29Q9UKF5 820 aa4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 COA3Q9Y2R0 106 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P2-201ENST00000411913 HGSO14964 777 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 CNOT4O95628 575 aaKnown RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 BCL6P41182 706 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 NANOS3P60323 173 aaKnown RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 PTH1RQ03431 593 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 LSM12Q3MHD2 195 aaKnown RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 POMZP3Q6PJE2 187 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 TMC5Q6UXY8 1006 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 DNAJC10Q8IXB1 793 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 CRACR2BQ8N4Y2 399 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 ARRDC4Q8NCT1 418 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 EXTL1Q92935 676 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 TMEM169Q96HH4 297 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZFR2Q9UPR6 939 aaKnown RBP4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZNF652Q9Y2D9 606 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 PCDHB4Q9Y5E5 795 aa4.21□□□□□ -1.74
HMGB3P2-201ENST00000411913 A0A087X1B8 175 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 NOP56O00567 594 aaKnown RBP4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 NARSO43776 548 aaKnown RBP4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 MYO1BO43795 1136 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 GTF2A2P52657 109 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 INHBCP55103 352 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 IQCEQ6IPM2 695 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 CCDC81Q6ZN84 652 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 IFNL2Q8IZJ0 200 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 AMER2Q8N7J2 671 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 NUDT10Q8NFP7 164 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 NUDT11Q96G61 164 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 CCDC9Q9Y3X0 531 aaKnown RBP4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 X6R8D5 127 aa4.2□□□□□ -1.74
HMGB3P2-201ENST00000411913 TCRBV5S2A0A599 114 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 ANKRD34BA5PLL1 514 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 LRG1P02750 347 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 ERCC3P19447 782 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 COMTP21964 271 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 DGCR2P98153 550 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 STEAP3Q658P3 488 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 TAX1BP1Q86VP1 789 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 TMEM87AQ8NBN3 555 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 PPP1R14AQ96A00 147 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZG16BQ96DA0 208 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 CHAMP1Q96JM3 812 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 APEX2Q9UBZ4 518 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 EMC9Q9Y3B6 208 aa4.19□□□□□ -1.74
HMGB3P2-201ENST00000411913 A0A1W2PQH9 124 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 EIF6P56537 245 aaKnown RBP4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 PPP2R5EQ16537 467 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZNF568Q3ZCX4 644 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZNF326Q5BKZ1 582 aaKnown RBP4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 AGBL4Q5VU57 503 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 KIAA1211LQ6NV74 962 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 Q6ZUG5 572 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 BVESQ8NE79 360 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 FRS2Q8WU20 508 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 KLHL6Q8WZ60 621 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 DIO2Q92813 273 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 EDAQ92838 391 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 CRAMP1Q96RY5 1269 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 APBA2Q99767 749 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 GZF1Q9H116 711 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 CYP26B1Q9NR63 512 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 TMEFF2Q9UIK5 374 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 SLC4A7Q9Y6M7 1214 aa4.18□□□□□ -1.74
HMGB3P2-201ENST00000411913 KLHL18O94889 574 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 FBXO21O94952 628 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZNF76P36508 570 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 MRPL58Q14197 206 aaKnown RBP4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 PHF19Q5T6S3 580 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 E4F1Q66K89 784 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms