RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 FAM122AQ96E09 287 aa16.59■□□□□ 0.25
HLA-DQB2-229ENST00000411527 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB2-229ENST00000411527 KRT23Q9C075 422 aa16.59■□□□□ 0.25
HLA-DQB2-229ENST00000411527 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
HLA-DQB2-229ENST00000411527 LINC01553A4QN01 128 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 OPLAHO14841 1288 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PPFIA4O75335 1185 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 ERVK-21P61565 698 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TRIM71Q2Q1W2 868 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MYSM1Q5VVJ2 828 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 OSBPL3Q9H4L5 887 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SIP14410 1827 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 LGR5O75473 907 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 RGS20O76081 388 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HOXA13P31271 388 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HIC1Q14526 733 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CELF3Q5SZQ8 465 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 IFIT1BQ5T764 474 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 LRFN3Q9BTN0 628 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CNNM2Q9H8M5 875 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PCDHA1Q9Y5I3 950 aa16.57■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HIP1O00291 1037 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 ZBTB5O15062 677 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PPP1R11O60927 126 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 GGPS1O95749 300 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 GHRHRQ02643 423 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PGM5Q15124 567 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 VSIG10LQ86VR7 867 aa16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB2-229ENST00000411527 EMSYQ7Z589 1322 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 RSPH10B2B2RC85 870 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 RSPH10BP0C881 870 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 THPOP40225 353 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SP2Q02086 613 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 NUCB1Q02818 461 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SAMD3Q8N6K7 520 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 DBF4BQ8NFT6 615 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MLXIPQ9HAP2 919 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MAD2L2Q9UI95 211 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 INSL6Q9Y581 213 aa16.55■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MICAL3Q7RTP6 2002 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 IGHDP01880 384 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 AMHP03971 560 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TGFB3P10600 412 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CCND2P30279 289 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 AAMPQ13685 434 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SEC23AQ15436 765 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TMEM31Q5JXX7 168 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 SERINC5Q86VE9 423 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 C17orf80Q9BSJ5 609 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 UBE2ZQ9H832 354 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 H3BRB1 525 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 GCOM1H8Y6P7 765 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 POLR2MP0CAP2 368 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 FBXO22Q8NEZ5 403 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PIGSQ96S52 555 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 CD320Q9NPF0 282 aa16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB2-229ENST00000411527 BRWD1Q9NSI6 2320 aa16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HTRA4P83105 476 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TRAF1Q13077 416 aa16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 PLEKHG4Q58EX7 1191 aa16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 BCAS3Q9H6U6 928 aa16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 HCN4Q9Y3Q4 1203 aa16.52■□□□□ 0.24
HLA-DQB2-229ENST00000411527 TREHO43280 583 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 GPR37L1O60883 481 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 LGALS2P05162 132 aa16.51■□□□□ 0.23
HLA-DQB2-229ENST00000411527 SMIM10L2AP0DMW4 78 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms