RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.41
CHMP3-205ENST00000409810 NECAB1Q8N987 351 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-205ENST00000409810 COPS5Q92905 334 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-205ENST00000409810 GPRASP2Q96D09 838 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 SEZ6LQ9BYH1 1024 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 RTEL1Q9NZ71 1219 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 MAFGO15525 162 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 RGS20O76081 388 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 MYL3P08590 195 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
CHMP3-205ENST00000409810 ZNF76P36508 570 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 RTP1P59025 263 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 ARHGAP1Q07960 439 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
CHMP3-205ENST00000409810 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 PGBD1Q96JS3 809 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 LLPHQ9BRT6 129 aaKnown RBP12.45□□□□□ -0.42
CHMP3-205ENST00000409810 MLXIPQ9HAP2 919 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
CHMP3-205ENST00000409810 A6NJR5 290 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 CTDNEP1O95476 244 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 GGPS1O95749 300 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 MMP3P08254 477 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 PTGS1P23219 599 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 ARHGAP4P98171 946 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 SETQ01105 290 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 MTMR1Q13613 665 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 TRIM29Q14134 588 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 DGKDQ16760 1214 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 CELF3Q5SZQ8 465 aaKnown RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 CXCL17Q6UXB2 119 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 PPTC7Q8NI37 304 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 SPATA33Q96N06 139 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 MTG1Q9BT17 334 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-205ENST00000409810 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 JADE2Q9NQC1 790 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 ATP11BQ9Y2G3 1177 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 UBIAD1Q9Y5Z9 338 aa12.44□□□□□ -0.42
CHMP3-205ENST00000409810 ARVCFO00192 962 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
CHMP3-205ENST00000409810 CYP3A4P08684 503 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 PURAQ00577 322 aaKnown RBP12.43□□□□□ -0.42
CHMP3-205ENST00000409810 TRIM60Q495X7 471 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 CEP55Q53EZ4 464 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 NIPA1Q7RTP0 329 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
CHMP3-205ENST00000409810 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 TLR3O15455 904 aaKnown RBP12.42□□□□□ -0.42
CHMP3-205ENST00000409810 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
CHMP3-205ENST00000409810 ITGB5P18084 799 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 SP2Q02086 613 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 ST3GAL1Q11201 340 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 ITGA7Q13683 1181 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 KRT25Q7Z3Z0 450 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 FAM184AQ8NB25 1140 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 TOX2Q96NM4 488 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 PHF20Q9BVI0 1012 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
CHMP3-205ENST00000409810 MYH9P35579 1960 aaKnown RBP12.41□□□□□ -0.42
CHMP3-205ENST00000409810 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 JAK2O60674 1132 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 CLTBP09497 229 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
CHMP3-205ENST00000409810 KCNA2P16389 499 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 KRT2P35908 639 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 USP11P51784 963 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 NONOQ15233 471 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHMP3-205ENST00000409810 CYFIP1Q7L576 1253 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 ANKRD33Q7Z3H0 272 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 KCNH7Q9NS40 1196 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 TCEAL9Q9UHQ7 104 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 KCNJ14Q9UNX9 436 aa12.41□□□□□ -0.42
CHMP3-205ENST00000409810 NFASCO94856 1347 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 LTBP2Q14767 1821 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 H0YGN5 161 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms