RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ZNF286BP0CG31 522 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 CALM1P0DP23 149 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 CALM2P0DP24 149 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 CALM3P0DP25 149 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 IL31RAQ8NI17 732 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 CUL5Q93034 780 aa17.03■□□□□ 0.32
CBX3-203ENST00000409747 YBX2Q9Y2T7 364 aaKnown RBP17.03■□□□□ 0.32
CBX3-203ENST00000409747 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
CBX3-203ENST00000409747 CUL9Q8IWT3 2517 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
CBX3-203ENST00000409747 SLC27A2O14975 620 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 SELPP16109 830 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 UBA1P22314 1058 aaKnown RBP17.02■□□□□ 0.32
CBX3-203ENST00000409747 LIFRP42702 1097 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 RBL2Q08999 1139 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 ALG1Q9BT22 464 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 MLXIPQ9HAP2 919 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.32
CBX3-203ENST00000409747 HAS3O00219 553 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 RABGGTBP53611 331 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 LRRC8DQ7L1W4 858 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
CBX3-203ENST00000409747 SMARCC2Q8TAQ2 1214 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 COL25A1Q9BXS0 654 aaPredicted RBP17.01■□□□□ 0.31
CBX3-203ENST00000409747 CHD7Q9P2D1 2997 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 PTK7Q13308 1070 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 NEDD9Q14511 834 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 HSDL1Q3SXM5 330 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
CBX3-203ENST00000409747 KIF28PB7ZC32 967 aa17■□□□□ 0.31
CBX3-203ENST00000409747 NOP56O00567 594 aaKnown RBP17■□□□□ 0.31
CBX3-203ENST00000409747 FIBPO43427 364 aa17■□□□□ 0.31
CBX3-203ENST00000409747 ICAM3P32942 547 aa17■□□□□ 0.31
CBX3-203ENST00000409747 KCNJ6P48051 423 aa17■□□□□ 0.31
CBX3-203ENST00000409747 NECTIN1Q15223 517 aa17■□□□□ 0.31
CBX3-203ENST00000409747 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
CBX3-203ENST00000409747 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
CBX3-203ENST00000409747 CKBP12277 381 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 SP2Q02086 613 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
CBX3-203ENST00000409747 TRIP12Q14669 1992 aaPredicted RBP16.99■□□□□ 0.31
CBX3-203ENST00000409747 VCANP13611 3396 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 SORBS3O60504 671 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
CBX3-203ENST00000409747 PCNX4Q63HM2 1172 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 METTL7BQ6UX53 244 aa16.99■□□□□ 0.31
CBX3-203ENST00000409747 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
CBX3-203ENST00000409747 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 EFCAB14O75071 495 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 IGFBP4P22692 258 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 CNKSR3Q6P9H4 555 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 SYNE3Q6ZMZ3 975 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 HERC6Q8IVU3 1022 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
CBX3-203ENST00000409747 USP38Q8NB14 1042 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 GPKOWQ92917 476 aaPredicted RBP eCLIP16.98■□□□□ 0.318e-6■■□□□ 13.6
CBX3-203ENST00000409747 C16orf70Q9BSU1 422 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
CBX3-203ENST00000409747 H3BRB1 525 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 MEIS2O14770 477 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 CXCL10P02778 98 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 CA3P07451 260 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 MYOGP15173 224 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 USP17L6PQ6QN14 398 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 SGMS1Q86VZ5 419 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 GIMAP8Q8ND71 665 aaPredicted RBP16.97■□□□□ 0.31
CBX3-203ENST00000409747 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
CBX3-203ENST00000409747 TUT1Q9H6E5 874 aaKnown RBP16.97■□□□□ 0.31
CBX3-203ENST00000409747 ZNF215Q9UL58 517 aaPredicted RBP16.97■□□□□ 0.31
CBX3-203ENST00000409747 EMSYQ7Z589 1322 aa16.97■□□□□ 0.31
CBX3-203ENST00000409747 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 TRANK1O15050 2925 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 LGALS2P05162 132 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 RXRAP19793 462 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 CDHR1Q96JP9 859 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 PSTPIP2Q9H939 334 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 RTEL1Q9NZ71 1219 aa16.96■□□□□ 0.31
CBX3-203ENST00000409747 ABHD14A-ACY1A0A1B0GW23 586 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 GNAT1P11488 350 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 WDR5P61964 334 aaKnown RBP16.96■□□□□ 0.3
CBX3-203ENST00000409747 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.3
CBX3-203ENST00000409747 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 CYFIP1Q7L576 1253 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 SERINC5Q86VE9 423 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms