RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 HOXC10Q9NYD6 342 aa11.46□□□□□ -0.57
PTMA-202ENST00000409115 TMX2Q9Y320 296 aa11.46□□□□□ -0.57
PTMA-202ENST00000409115 TTC28Q96AY4 2481 aa11.46□□□□□ -0.58
PTMA-202ENST00000409115 ADCY6O43306 1168 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 STRNO43815 780 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 IGSF3O75054 1194 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 RAG1P15918 1043 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 ADD2P35612 726 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 TXLNAP40222 546 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 CDK8P49336 464 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 SMAD3P84022 425 aaKnown RBP11.45□□□□□ -0.58
PTMA-202ENST00000409115 HNRNPUQ00839 825 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTMA-202ENST00000409115 ZNF211Q13398 564 aaPredicted RBP11.45□□□□□ -0.58
PTMA-202ENST00000409115 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
PTMA-202ENST00000409115 ERC1Q8IUD2 1116 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 MB21D1Q8N884 522 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 EGFL7Q9UHF1 273 aa11.45□□□□□ -0.58
PTMA-202ENST00000409115 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
PTMA-202ENST00000409115 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 ADAMTS4O75173 837 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 ZNF865P0CJ78 1059 aaPredicted RBP11.44□□□□□ -0.58
PTMA-202ENST00000409115 FPGSQ05932 587 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 ZNF792Q3KQV3 632 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 C16orf86Q6ZW13 317 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 ABRAQ8N0Z2 381 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 HELQQ8TDG4 1101 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 TINF2Q9BSI4 451 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 PAG1Q9NWQ8 432 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 SLC5A4Q9NY91 659 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
PTMA-202ENST00000409115 SWAP70Q9UH65 585 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
PTMA-202ENST00000409115 PPP1R9AQ9ULJ8 1098 aa11.44□□□□□ -0.58
PTMA-202ENST00000409115 DNMT3AQ9Y6K1 912 aaPredicted RBP11.44□□□□□ -0.58
PTMA-202ENST00000409115 MYH6P13533 1939 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 ZBED9Q6R2W3 1325 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 SOBPA7XYQ1 873 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 GRXCR1A8MXD5 290 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 VWA5AO00534 786 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 AKR1A1P14550 325 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 PTGS1P23219 599 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 FAAP100Q0VG06 881 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 KCTD2Q14681 263 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 RTN1Q16799 776 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 PPM1EQ8WY54 764 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 MYO19Q96H55 970 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.43□□□□□ -0.582e-8■■■□□ 17.4
PTMA-202ENST00000409115 SAP130Q9H0E3 1048 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 RAPGEFL1Q9UHV5 662 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
PTMA-202ENST00000409115 TRIP12Q14669 1992 aaPredicted RBP11.43□□□□□ -0.58
PTMA-202ENST00000409115 H3BRB1 525 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 SLC25A27O95847 323 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 IFIT2P09913 472 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 STAT3P40763 770 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 COX20Q5RI15 118 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 SNRNP48Q6IEG0 339 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 RNF180Q86T96 592 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 CLASRPQ8N2M8 674 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 CHMP4CQ96CF2 233 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 KIF1BPQ96EK5 621 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 FGD4Q96M96 766 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 PUS7LQ9H0K6 701 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 ANO2Q9NQ90 1003 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 STARD7Q9NQZ5 370 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 TMEM39AQ9NV64 488 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 SLC4A4Q9Y6R1 1079 aa11.42□□□□□ -0.58
PTMA-202ENST00000409115 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
PTMA-202ENST00000409115 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 SNAI1O95863 264 aaPredicted RBP11.41□□□□□ -0.58
PTMA-202ENST00000409115 ACRP10323 421 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 ACLYP53396 1101 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 CTR9Q6PD62 1173 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTMA-202ENST00000409115 TBX21Q9UL17 535 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
PTMA-202ENST00000409115 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
PTMA-202ENST00000409115 NDUFB10O96000 172 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 ATP4AP20648 1035 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 MTMR3Q13615 1198 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 KCNA10Q16322 511 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 TSHZ3Q63HK5 1081 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 TMED8Q6PL24 325 aaPredicted RBP11.4□□□□□ -0.58
PTMA-202ENST00000409115 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.587e-11■■■■■ 40.2
PTMA-202ENST00000409115 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 GLYCTKQ8IVS8 523 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms