RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TMEM60Q9H2L4 133 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 CA4P22748 312 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 SPARCL1Q14515 664 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 ENGASEQ8NFI3 743 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 GRAMD1AQ96CP6 724 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 LRRC37BQ96QE4 947 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 TBK1Q9UHD2 729 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 H3BQF6 201 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
SMPD4-202ENST00000409031 PRR29P0C7W0 189 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 BYSLQ13895 437 aaKnown RBP19.17■□□□□ 0.66
SMPD4-202ENST00000409031 TEX9Q8N6V9 391 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
SMPD4-202ENST00000409031 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.17■□□□□ 0.66
SMPD4-202ENST00000409031 ZSWIM5Q9P217 1185 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 CDC25AP30304 524 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 CUL3Q13618 768 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 PNKPQ96T60 521 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 SLITRK6Q9H5Y7 841 aa19.17■□□□□ 0.66
SMPD4-202ENST00000409031 LIMA1Q9UHB6 759 aaKnown RBP19.17■□□□□ 0.66
SMPD4-202ENST00000409031 GYG2O15488 501 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 ADD2P35612 726 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 CUL4BQ13620 913 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 OTUD6AQ7L8S5 288 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 STAMBPL1Q96FJ0 436 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 OLFM3Q96PB7 478 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
SMPD4-202ENST00000409031 HIBADHP31937 336 aaKnown RBP19.16■□□□□ 0.66
SMPD4-202ENST00000409031 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 CCDC93Q567U6 631 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.16■□□□□ 0.66
SMPD4-202ENST00000409031 CYFIP2Q96F07 1278 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 SEC16BQ96JE7 1060 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 ATP7AQ04656 1500 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 PARP10Q53GL7 1025 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 KSR1Q8IVT5 923 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 RDH13Q8NBN7 331 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 NUDCD1Q96RS6 583 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 CARD10Q9BWT7 1032 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 SNX24Q9Y343 169 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 TACC3Q9Y6A5 838 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 PRCPP42785 496 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 SYT2Q8N9I0 419 aaPredicted RBP19.16■□□□□ 0.66
SMPD4-202ENST00000409031 IWS1Q96ST2 819 aa19.16■□□□□ 0.66
SMPD4-202ENST00000409031 NLRP1Q9C000 1473 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 CYP2J2P51589 502 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 PMS2P54278 862 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 KLC1Q07866 573 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 KIFC2Q96AC6 838 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 FBXL5Q9UKA1 691 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.15■□□□□ 0.66
SMPD4-202ENST00000409031 INHBAP08476 426 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 ARL1P40616 181 aaPredicted RBP19.15■□□□□ 0.66
SMPD4-202ENST00000409031 HDLBPQ00341 1268 aaKnown RBP19.15■□□□□ 0.66
SMPD4-202ENST00000409031 MKRN3Q13064 507 aaKnown RBP19.15■□□□□ 0.66
SMPD4-202ENST00000409031 CYB5D1Q6P9G0 228 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 RSRC2Q7L4I2 434 aaKnown RBP19.15■□□□□ 0.66
SMPD4-202ENST00000409031 MIS12Q9H081 205 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 CD248Q9HCU0 757 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 ATG3Q9NT62 314 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 CEP72Q9P209 647 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 CHMP2AO43633 222 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 PTGISQ16647 500 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 C3orf20Q8ND61 904 aa19.15■□□□□ 0.66
SMPD4-202ENST00000409031 BFSP1Q12934 665 aa19.14■□□□□ 0.66
SMPD4-202ENST00000409031 PUS7LQ9H0K6 701 aaKnown RBP19.14■□□□□ 0.66
SMPD4-202ENST00000409031 KLRF2D3W0D1 207 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 NR1H3Q13133 447 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ANKRD20A4Q4UJ75 823 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ANKRD20A8PQ5CZ79 823 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ANKRD20A2Q5SQ80 823 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ANKRD20A1Q5TYW2 823 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 FXR1P51114 621 aaKnown RBP eCLIP19.14■□□□□ 0.65
SMPD4-202ENST00000409031 PACS2Q86VP3 889 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 SDR42E1Q8WUS8 393 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 CHP1Q99653 195 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 PCDH11XQ9BZA7 1347 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 PCDH11YQ9BZA8 1340 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 LRRC53A6NM62 1247 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ACSL3O95573 720 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 ADORA1P30542 326 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 MMGT1Q8N4V1 131 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 SAP30BPQ9UHR5 308 aaKnown RBP19.14■□□□□ 0.65
SMPD4-202ENST00000409031 SCINQ9Y6U3 715 aa19.14■□□□□ 0.65
SMPD4-202ENST00000409031 CASP1P29466 404 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 MRPS35P82673 323 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.13■□□□□ 0.651e-6■■■□□ 15.9
SMPD4-202ENST00000409031 EDEM3Q9BZQ6 932 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 USP42Q9H9J4 1324 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 FOXN1O15353 648 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 NCK2O43639 380 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 DEUP1Q05D60 604 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 AZI2Q9H6S1 392 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 MIF4GDA9UHW6 222 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 SPAG7O75391 227 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 STK10O94804 968 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 KRT14P02533 472 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms