RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RLFQ13129 1914 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PASKQ96RG2 1323 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 COL11A1P12107 1806 aaPredicted RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 FSD2A1L4K1 749 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 IPO5O00410 1097 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 MEIS1O00470 390 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SORBS3O60504 671 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SSBP05455 408 aaKnown RBP eCLIP4.17□□□□□ -1.74
RTN4-208ENST00000404909 PLCB2Q00722 1185 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SETQ01105 290 aaPredicted RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 CYP4A11Q02928 519 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PDIA5Q14554 519 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 KCTD2Q14681 263 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 KANK3Q6NY19 840 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 RBM43Q6ZSC3 357 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 ANKRD23Q86SG2 305 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 RASAL3Q86YV0 1011 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SAMD3Q8N6K7 520 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 GPRC5AQ8NFJ5 357 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SMARCE1Q969G3 411 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PARK7Q99497 189 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 PYM1Q9BRP8 204 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 CCSER1Q9C0I3 900 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PORCNQ9H237 461 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PFASO15067 1338 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 RPTORQ8N122 1335 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 CEP350Q5VT06 3117 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 TBX3O15119 743 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SLC25A27O95847 323 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 CCND2P30279 289 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SP4Q02446 784 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 GHRHRQ02643 423 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 E2F4Q16254 413 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 STX1AQ16623 288 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 EEPD1Q7L9B9 569 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 TRMT1LQ7Z2T5 733 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 MMP19Q99542 508 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 FUCA2Q9BTY2 467 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 TCEAL9Q9UHQ7 104 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 KIAA1024Q9UPX6 916 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 SAMM50Q9Y512 469 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 POTEB3A0JP26 581 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 TMEM88BA6NKF7 163 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 IGF2BP3O00425 579 aaKnown RBP eCLIP4.16□□□□□ -1.746e-8■■□□□ 13.7
RTN4-208ENST00000404909 TOMM70O94826 608 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 FCER1AP12319 257 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MRE11P49959 708 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 CCNA1P78396 465 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MDM2Q00987 491 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 FSTL1Q12841 308 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 GRB10Q13322 594 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 CUL4BQ13620 913 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 TAF1CQ15572 869 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 ECM1Q16610 540 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 DPCR1Q3MIW9 517 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 NAALADL2Q58DX5 795 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 HAUS3Q68CZ6 603 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 PDXDC2PQ6P474 469 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 POTEBQ6S5H4 581 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 VSIG10LQ86VR7 867 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ERMNQ8TAM6 284 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 LRRC15Q8TF66 581 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MTRQ99707 1265 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 JADE2Q9NQC1 790 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ANO10Q9NW15 660 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 CPA4Q9UI42 421 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 TLL2Q9Y6L7 1015 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 PARP14Q460N5 1801 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 POTEFA5A3E0 1075 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 EML1O00423 815 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 PSMD10O75832 226 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SMC2O95347 1197 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 XRCC6P12956 609 aaKnown RBP eCLIP4.16□□□□□ -1.74
RTN4-208ENST00000404909 YY1P25490 414 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 GCLCP48506 637 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 ZNF165P49910 485 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SPIRE1Q08AE8 756 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 L1TD1Q5T7N2 865 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 CYP4F22Q6NT55 531 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 POTEGQ6S5H5 508 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SEPT14Q6ZU15 432 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 C11orf57Q6ZUT1 292 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 OTOP1Q7RTM1 612 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 LUZP1Q86V48 1076 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 TPH2Q8IWU9 490 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 GTF3C2Q8WUA4 911 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 SLC5A5Q92911 643 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 PNMA5Q96PV4 448 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ZIC5Q96T25 663 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 TEKT3Q9BXF9 490 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MROH8Q9H579 483 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 RGL1Q9NZL6 768 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ADD3Q9UEY8 706 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 USP25Q9UHP3 1055 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 VAV3Q9UKW4 847 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SLC45A1Q9Y2W3 748 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 UBIAD1Q9Y5Z9 338 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 IVNS1ABPQ9Y6Y0 642 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MANSC4A6NHS7 340 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 E9PMD0 336 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms