RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 WNT8AQ9H1J5 351 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 SCN10AQ9Y5Y9 1956 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 A0A0C4DFX4 3053 aa15.32■□□□□ 0.04
SDF4-203ENST00000403997 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 GOLGA8BA8MQT2 603 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
SDF4-203ENST00000403997 PSEN2P49810 448 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 PTGISQ16647 500 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 BLOC1S2Q6QNY1 142 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 RETREG2Q8NC44 543 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 KATNAL1Q9BW62 490 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 SEMA6BQ9H3T3 888 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 SNX14Q9Y5W7 946 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
SDF4-203ENST00000403997 FRMPD4Q14CM0 1322 aa15.31■□□□□ 0.04
SDF4-203ENST00000403997 MYH7BA7E2Y1 1941 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 ICAM3P32942 547 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 BFSP2Q13515 415 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 MFSD10Q14728 455 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 UBE2SQ16763 222 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 PCNX4Q63HM2 1172 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 GDF6Q6KF10 455 aaPredicted RBP15.3■□□□□ 0.04
SDF4-203ENST00000403997 XRRA1Q6P2D8 792 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 Q6ZUG5 572 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 OTOP2Q7RTS6 562 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 HERVK_113Q902F9 699 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
SDF4-203ENST00000403997 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
SDF4-203ENST00000403997 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 PPP4R2Q9NY27 417 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
SDF4-203ENST00000403997 CNTNAP5Q8WYK1 1306 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 FIBPO43427 364 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 APOBRQ0VD83 1088 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 NEDD9Q14511 834 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 DEFB128Q7Z7B8 93 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 NLRX1Q86UT6 975 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
SDF4-203ENST00000403997 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 HAS3O00219 553 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
SDF4-203ENST00000403997 F2P00734 622 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
SDF4-203ENST00000403997 PSMA5P28066 241 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 CDC27P30260 824 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 RCAN1P53805 252 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 NAPAP54920 295 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 FUT2Q10981 343 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 SEMA3FQ13275 785 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 CYFIP1Q7L576 1253 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 CCDC155Q8N6L0 562 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 BRF1Q92994 677 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 GUCD1Q96NT3 240 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
SDF4-203ENST00000403997 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
SDF4-203ENST00000403997 GTF2IRD1Q9UHL9 959 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 PCDHA6Q9UN73 950 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 PCDHA8Q9Y5H6 950 aa15.28■□□□□ 0.04
SDF4-203ENST00000403997 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 PFKMP08237 780 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 IQCF3P0C7M6 154 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 RPS6KB1P23443 525 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 DNAJB2P25686 324 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 ADD1P35611 737 aaKnown RBP15.27■□□□□ 0.04
SDF4-203ENST00000403997 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.04
SDF4-203ENST00000403997 METTL7BQ6UX53 244 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 C16orf70Q9BSU1 422 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 FTOQ9C0B1 505 aaKnown RBP eCLIP15.27■□□□□ 0.04
SDF4-203ENST00000403997 TTYH1Q9H313 450 aaPredicted RBP15.27■□□□□ 0.04
SDF4-203ENST00000403997 EHMT1Q9H9B1 1298 aa15.27■□□□□ 0.04
SDF4-203ENST00000403997 ZBBXA8MT70 800 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 RFC2P35250 354 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 ADCY7P51828 1080 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
SDF4-203ENST00000403997 SP4Q02446 784 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 VWCEQ96DN2 955 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 CTAGE1Q96RT6 745 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
SDF4-203ENST00000403997 SENP7Q9BQF6 1050 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 RIC8AQ9NPQ8 531 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 SLC4A7Q9Y6M7 1214 aa15.26■□□□□ 0.03
SDF4-203ENST00000403997 TMEM265A0A087WTH1 108 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 SMCO2A6NFE2 343 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 H3BRB1 525 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 STXBP3O00186 592 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms