RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SUGT1Q9Y2Z0 365 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 CAPN6Q9Y6Q1 641 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 GOLGA6BA6NDN3 693 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 CCNT1O60563 726 aaKnown RBP21.98■■□□□ 1.11
CCDC47-202ENST00000403162 PLEKP08567 350 aaPredicted RBP21.98■■□□□ 1.11
CCDC47-202ENST00000403162 TSPY3P0CV98 308 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 TSPY8P0CW00 308 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 SLC4A8Q2Y0W8 1093 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 VWA3BQ502W6 1294 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 FAM76AQ8TAV0 307 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 GDAP1L1Q96MZ0 367 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 LTBP3Q9NS15 1303 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 NAV1Q8NEY1 1877 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 TCP1P17987 556 aaKnown RBP21.97■■□□□ 1.11
CCDC47-202ENST00000403162 KIF11P52732 1056 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 CORO7P57737 925 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 LETM2Q2VYF4 491 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 ARHGAP27Q6ZUM4 889 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 MMTAG2Q9BU76 263 aaKnown RBP21.97■■□□□ 1.11
CCDC47-202ENST00000403162 ZNRF3Q9ULT6 936 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 NKRFO15226 690 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCDC47-202ENST00000403162 RAD17O75943 681 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 LDHCP07864 332 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 NEK8Q86SG6 692 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
CCDC47-202ENST00000403162 JDP2Q8WYK2 163 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 TMEM47Q9BQJ4 181 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 NDST4Q9H3R1 872 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 HYOU1Q9Y4L1 999 aa21.97■■□□□ 1.11
CCDC47-202ENST00000403162 SRCAPQ6ZRS2 3230 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 NAPAP54920 295 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 CCDC84Q86UT8 332 aaPredicted RBP21.96■■□□□ 1.11
CCDC47-202ENST00000403162 SPATA4Q8NEY3 305 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 CALML4Q96GE6 196 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 ZFP91Q96JP5 570 aaPredicted RBP21.96■■□□□ 1.11
CCDC47-202ENST00000403162 ALS2CR12Q96Q35 445 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 OSBPL9Q96SU4 736 aa21.96■■□□□ 1.11
CCDC47-202ENST00000403162 GOLGA6CA6NDK9 693 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 GOLGA6DP0CG33 693 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 GNA11P29992 359 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 FKBP1AP62942 108 aaKnown RBP21.95■■□□□ 1.1
CCDC47-202ENST00000403162 MAN2A1Q16706 1144 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 SLF2Q8IX21 1173 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 MLXIPQ9HAP2 919 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 C6orf50Q9HD87 102 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 GOLGA6AQ9NYA3 693 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 PVALEFA0A1B0GWK0 134 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 KLRF2D3W0D1 207 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 PJA2O43164 708 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 HOXA7P31268 230 aaPredicted RBP21.95■■□□□ 1.1
CCDC47-202ENST00000403162 EIF4A3P38919 411 aaKnown RBP21.95■■□□□ 1.1
CCDC47-202ENST00000403162 ZNF444Q8N0Y2 327 aaPredicted RBP21.95■■□□□ 1.1
CCDC47-202ENST00000403162 LRRC1Q9BTT6 524 aa21.95■■□□□ 1.1
CCDC47-202ENST00000403162 MYH10P35580 1976 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 EPHB6O15197 1021 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 MOCS3O95396 460 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 FGFR1OPO95684 399 aaKnown RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 TECP42680 631 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 UNC13DQ70J99 1090 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SV2BQ7L1I2 683 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 KIAA0825Q8IV33 1275 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SH3RF3Q8TEJ3 882 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SH3GL2Q99962 352 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 EFCC1Q9HA90 598 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 STK17AQ9UEE5 414 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SMCO2A6NFE2 343 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 VGLL3A8MV65 326 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 TNFRSF8P28908 595 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SCNN1DP51172 638 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 DNAJC21Q5F1R6 531 aaKnown RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SND1Q7KZF4 910 aaKnown RBP eCLIP21.94■■□□□ 1.11e-7■■■■■ 29.2
CCDC47-202ENST00000403162 GUF1Q8N442 669 aaKnown RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 DEF6Q9H4E7 631 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 SLC39A2Q9NP94 309 aa21.94■■□□□ 1.1
CCDC47-202ENST00000403162 FAM207AQ9NSI2 230 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 DMGDHQ9UI17 866 aaKnown RBP21.94■■□□□ 1.1
CCDC47-202ENST00000403162 PRELPP51888 382 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 EPHB4P54760 987 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 GBP6Q6ZN66 633 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 CCDC155Q8N6L0 562 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 HDAC7Q8WUI4 952 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 HPS3Q969F9 1004 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 EDEM3Q9BZQ6 932 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 STX8Q9UNK0 236 aa21.93■■□□□ 1.1
CCDC47-202ENST00000403162 GOLGA8KD6RF30 607 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 BAG3O95817 575 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 RASA1P20936 1047 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 LRRC63Q05C16 580 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 PPFIA1Q13136 1202 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 GRB10Q13322 594 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 EMBQ6PCB8 327 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 FOXR2Q6PJQ5 311 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 BLOC1S4Q9NUP1 217 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 AKR1B10O60218 316 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 GOLGA8HP0CJ92 632 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCDC47-202ENST00000403162 SMARCA1P28370 1054 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 NFRKBQ6P4R8 1299 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 TBCKQ8TEA7 893 aa21.92■■□□□ 1.1
CCDC47-202ENST00000403162 BAP1Q92560 729 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms