RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
SCFD2-202ENST00000401642 DDTLA6NHG4 134 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 SHMT1P34896 483 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 PRPHP41219 470 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MAGEA1P43355 309 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 KIF11P52732 1056 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 HDXQ7Z353 690 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 HDAC7Q8WUI4 952 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MS4A14Q96JA4 679 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 ADAM21Q9UKJ8 722 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 ZNF76P36508 570 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 PSMC6P62333 389 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 COASYQ13057 564 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 FAM26FQ5R3K3 315 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 HAS1Q92839 578 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 MTMR9Q96QG7 549 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 TSG101Q99816 390 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
SCFD2-202ENST00000401642 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 FAM53CQ9NYF3 392 aa12.29□□□□□ -0.44
SCFD2-202ENST00000401642 BRD3Q15059 726 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 WHAMMP3Q1A5X7 153 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 ASPRV1Q53RT3 343 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 FTCDO95954 541 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 MYBL2P10244 700 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 ACTN1P12814 892 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 PCDHA13Q9Y5I0 950 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 A0A1W2PQC6 194 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 POLRMTO00411 1230 aaKnown RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 MMP10P09238 476 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 TNRC6CQ9HCJ0 1690 aaKnown RBP12.28□□□□□ -0.44
SCFD2-202ENST00000401642 PCNTO95613 3336 aa12.28□□□□□ -0.44
SCFD2-202ENST00000401642 CLRN2A0PK11 232 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 CLIC2O15247 247 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.44
SCFD2-202ENST00000401642 PLA2G4BP0C869 781 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 CAPN2P17655 700 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 CRKP46108 304 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 GPS2Q13227 327 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 KSR1Q8IVT5 923 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 PIGOQ8TEQ8 1089 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.44
SCFD2-202ENST00000401642 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 ZBTB5O15062 677 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.45
SCFD2-202ENST00000401642 CHRNA5P30532 468 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 AMPD2Q01433 879 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 CRY2Q49AN0 593 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 FNBP4Q8N3X1 1017 aaPredicted RBP12.27□□□□□ -0.45
SCFD2-202ENST00000401642 FAM133AQ8N9E0 248 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 RGL1Q9NZL6 768 aa12.27□□□□□ -0.45
SCFD2-202ENST00000401642 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
SCFD2-202ENST00000401642 ESYT3A0FGR9 886 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 ZBTB39O15060 712 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CASP5P51878 434 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CENPPQ6IPU0 288 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 SH2D3AQ9BRG2 576 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CUEDC2Q9H467 287 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 ADAMTS1Q9UHI8 967 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 L1RE1Q9UN81 338 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCFD2-202ENST00000401642 ROBO3Q96MS0 1386 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 TACC1O75410 805 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 MED24O75448 989 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CFBP00751 764 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CYP2C19P33261 490 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 ADAM9Q13443 819 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 MAN2A1Q16706 1144 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 NUP58Q9BVL2 599 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 RIC8AQ9NPQ8 531 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 CCDC66A2RUB6 948 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 DDX39AO00148 427 aaKnown RBP12.26□□□□□ -0.45
SCFD2-202ENST00000401642 ICA1Q05084 483 aa12.26□□□□□ -0.45
SCFD2-202ENST00000401642 RDH13Q8NBN7 331 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms