RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 STIM2Q9P246 746 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 FEZ2Q9UHY8 353 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 RCOR1Q9UKL0 485 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ERBB4Q15303 1308 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SYNJ2BP-COX16A0A087WUM0 186 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 HNRNPDLO14979 420 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 SH3BP5O60239 455 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CRCPO75575 148 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ATP1A3P13637 1013 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SAT1P21673 171 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 PSMD6Q15008 389 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZSCAN26Q16670 478 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SESTD1Q86VW0 696 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 TAB3Q8N5C8 712 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 NLRP4Q96MN2 994 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 IWS1Q96ST2 819 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 AMNQ9BXJ7 453 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZNF341Q9BYN7 854 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 C1orf112Q9NSG2 853 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 COX16Q9P0S2 106 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SEPT10Q9P0V9 454 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 MAGED2Q9UNF1 606 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 PTPRMP28827 1452 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 PALLDQ8WX93 1383 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SGK1O00141 431 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GIPC1O14908 333 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 THAP12O43422 761 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 BBOX1O75936 387 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CHGBP05060 677 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MMP10P09238 476 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CTNNA1P35221 906 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 PDE6CP51160 858 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 YARSP54577 528 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 MKRN3Q13064 507 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 RESTQ13127 1097 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CLUL1Q15846 466 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CEP85LQ5SZL2 805 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GKAP1Q5VSY0 366 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 PHLDB2Q86SQ0 1253 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 STMN2Q93045 179 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DCPSQ96C86 337 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 AK8Q96MA6 479 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PLCB1Q9NQ66 1216 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 FAM196BA6NMK8 535 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 EFCAB8A8MWE9 144 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 M0QZ92 97 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CYP2D6P10635 497 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 INPP5BP32019 993 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DDIT3P35638 169 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MRPS25P82663 173 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 SCARF1Q14162 830 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 FAM26FQ5R3K3 315 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCDC125Q86Z20 511 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PALM2Q8IXS6 379 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 NAV1Q8NEY1 1877 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCT6BQ92526 530 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ATP2A3Q93084 1043 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 STRBPQ96SI9 672 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 TEKT3Q9BXF9 490 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DPH5Q9H2P9 285 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 LY9Q9HBG7 655 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 POLD4Q9HCU8 107 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PIH1D3Q9NQM4 214 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 SPTLC3Q9NUV7 552 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 TRPC5Q9UL62 973 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 C21orf2O43822 256 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GFPT2O94808 682 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MYCP01106 439 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 BMP3P12645 472 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 P4HA1P13674 534 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ALDH3A1P30838 453 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 OSTNP61366 133 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 FOXO4P98177 505 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MYL7Q01449 175 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 C2orf54Q08AI8 447 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PPFIA1Q13136 1202 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DCAF15Q66K64 600 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CEP128Q6ZU80 1094 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CTAGE3PQ8IX95 158 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ENAHQ8N8S7 591 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 ZNF653Q96CK0 615 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PPP1R16BQ96T49 567 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PARVGQ9HBI0 331 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PDE11AQ9HCR9 933 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 BSDC1Q9NW68 430 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 NEDD4P46934 1319 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ANKRD31Q8N7Z5 1873 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CHD5Q8TDI0 1954 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 POC1B-GALNT4F8VUJ3 575 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 INO80B-WBP1J3KQ70 363 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ADCY8P40145 1251 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PRCPP42785 496 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 LACTBP83111 547 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 NAA25Q14CX7 972 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 AOC3Q16853 763 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ANKRD42Q8N9B4 389 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 FAM133AQ8N9E0 248 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CNKSR1Q969H4 720 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCDC17Q96LX7 622 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GSDMAQ96QA5 445 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms