RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SMARCAL1Q9NZC9 954 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 MAP3K15Q6ZN16 1313 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SERPINB8P50452 374 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 MCTP2Q6DN12 878 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 RAPGEF5Q92565 580 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SLC26A6Q9BXS9 759 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 NRDE2Q9H7Z3 1164 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PURAQ00577 322 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 CCDC157Q569K6 752 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SYCP2LQ5T4T6 812 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 RASSF6Q6ZTQ3 369 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PLEKHA8Q96JA3 519 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PRPF18Q99633 342 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PARP1P09874 1014 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 GJB2P29033 226 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 S100GP29377 79 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 ITKQ08881 620 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 IFT88Q13099 833 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SV2BQ7L1I2 683 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 BBS7Q8IWZ6 715 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM49P0CI25 452 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM49CP0CI26 452 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 APPL2Q8NEU8 664 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 VAV3Q9UKW4 847 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 NR1H3Q13133 447 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 IFIT5Q13325 482 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 CCDC36Q8IYA8 594 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SAR1BQ9Y6B6 198 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 NFIBO00712 420 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 BACH1O14867 736 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 CARD6Q9BX69 1037 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM31Q9BZY9 425 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SLC12A6Q9UHW9 1150 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 NFU1Q9UMS0 254 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 DNAJC6O75061 913 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF189O75820 626 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 ABCB1P08183 1280 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 EPS8Q12929 822 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 VPS39Q96JC1 886 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 NCKAP1LP55160 1127 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 MECOMQ03112 1051 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM161BQ96MY7 647 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 DKK3Q9UBP4 350 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 H2AFY2Q9P0M6 372 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 INTUQ9ULD6 942 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SLC4A7Q9Y6M7 1214 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 ARF4P18085 180 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 HMG20AQ9NP66 347 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 TUBA8Q9NY65 449 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 SEL1LQ9UBV2 794 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 H0YCG3 227 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 CPP00450 1065 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 PLCG2P16885 1265 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 COPB2P35606 906 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 DNM2P50570 870 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 TTC23Q5W5X9 447 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 MICU3Q86XE3 530 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 AP4S1Q9Y587 144 aa9.24□□□□□ -0.93
CACNA1C-220ENST00000399655 A6NJR5 290 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ESRRAP11474 423 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 GUCA1AP43080 201 aaPredicted RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM67Q6ZTA4 783 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 EPC1Q9H2F5 836 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 KHDRBS3O75525 346 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ANP32DO95626 131 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 SPOUT1Q5T280 376 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 CCDC51Q96ER9 411 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM25AB3EWG3 89 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM25CB3EWG5 89 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM25GB3EWG6 89 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 MAPRE2Q15555 327 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM32AQ9Y421 112 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 SYNRGQ9UMZ2 1314 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 F13A1P00488 732 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 HSPD1P10809 573 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 C2CD6Q53TS8 623 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 C19orf18Q8NEA5 215 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 BATF3Q9NR55 127 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ARHGEF37A1IGU5 675 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 IL6P05231 212 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF304Q9HCX3 659 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 SMIM31A0A1B0GVY4 71 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 DLGAP3O95886 979 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 IL12RB1P42701 662 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 SERPINB4P48594 390 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 JDP2Q8WYK2 163 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 ZBTB1Q9Y2K1 713 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 TEX46H3BTG2 121 aa9.23□□□□□ -0.93
CACNA1C-220ENST00000399655 PTPN1P18031 435 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms