RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ABCC1P33527 1531 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 B4E1Z4 1266 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ADCY3O60266 1144 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 KRT8P05787 483 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CCND2P30279 289 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 IFNAR2P48551 515 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 MECOMQ03112 1051 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 JPH2Q9BR39 696 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 EYA2O00167 538 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ARIH2O95376 493 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 NFKBIAP25963 317 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 RECQLP46063 649 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TFAP4Q01664 338 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TMTC3Q6ZXV5 915 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 LRRC8CQ8TDW0 803 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 LZTS2Q9BRK4 669 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CAPN10Q9HC96 672 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 SGK1O00141 431 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 LUC7L3O95232 432 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 LLGL1Q15334 1064 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CALCRLQ16602 461 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 XDHP47989 1333 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CFAP69A5D8W1 941 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 LMNB1P20700 586 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 KDRP35968 1356 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 SEC24DO94855 1032 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 DYNLT1P63172 113 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PDE1BQ01064 536 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 RLBP1P12271 317 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ACTN1P12814 892 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PLCD1P51178 756 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 SPAG1Q07617 926 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PEX26Q7Z412 305 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 IGSF22Q8N9C0 903 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 CYP2J2P51589 502 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 DSTYKQ6XUX3 929 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 P3H4Q92791 437 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 BCL2L14Q9BZR8 327 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 FAM49AQ9H0Q0 323 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 CHCHD3Q9NX63 227 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ZSCAN22P10073 491 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 OCA2Q04671 838 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 TBC1D8BQ0IIM8 1120 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ZFP42Q96MM3 310 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 ATP11BQ9Y2G3 1177 aa12.03□□□□□ -0.48
CACNA1C-217ENST00000399641 TIMM10P62072 90 aa12.02□□□□□ -0.48
CACNA1C-217ENST00000399641 KITP10721 976 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 TMEM247A6NEH6 219 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 H0YCG3 227 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 WDR47O94967 919 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 SERPIND1P05546 499 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 NNMTP40261 264 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 ARL4DP49703 201 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 WASHC5Q12768 1159 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 NDUFB9Q9Y6M9 179 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 TMED2Q15363 201 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms