RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 MTF1Q14872 753 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 VWA3BQ502W6 1294 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 NUDT12Q9BQG2 462 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 DESI2Q9BSY9 194 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MRPL44Q9H9J2 332 aaKnown RBP19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZNRF3Q9ULT6 936 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 RABGAP1Q9Y3P9 1069 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MRFAP1Q9Y605 127 aa19.7■□□□□ 0.74
HLA-DQB1-204ENST00000399084 B4DLN1 442 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PES1O00541 588 aaKnown RBP19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 NDUFA10O95299 355 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PLA2G4BP0C869 781 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ERVK-24P63145 666 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MIIPQ5JXC2 388 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 FAM26FQ5R3K3 315 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 EHBP1Q8NDI1 1231 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 WDR24Q96S15 920 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ARGLU1Q9NWB6 273 aaPredicted RBP19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 KIAA1024Q9UPX6 916 aa19.69■□□□□ 0.74
HLA-DQB1-204ENST00000399084 FRMD3A2A2Y4 597 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 IPO7O95373 1038 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 COASYQ13057 564 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 POLR3CQ9BUI4 534 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 NUCKS1Q9H1E3 243 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 NDST4Q9H3R1 872 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 DNM3Q9UQ16 869 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MARSP56192 900 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 KCNK18Q7Z418 384 aa19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 MRPL11Q9Y3B7 192 aaKnown RBP19.68■□□□□ 0.74
HLA-DQB1-204ENST00000399084 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CTAGE9A4FU28 777 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PSMD14O00487 310 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TADA3O75528 432 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SPIRE1Q08AE8 756 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 EDRF1Q3B7T1 1238 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZCWPW2Q504Y3 356 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CEP112Q8N8E3 955 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 OGFRQ9NZT2 677 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZBTB21Q9ULJ3 1066 aa19.67■□□□□ 0.74
HLA-DQB1-204ENST00000399084 RNF225M0QZC1 329 aaPredicted RBP19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 H2AFXP16104 143 aaPredicted RBP19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 BAG6P46379 1132 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ELF2Q15723 593 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ECM1Q16610 540 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PRR16Q569H4 304 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 NIM1KQ8IY84 436 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TXLNBQ8N3L3 684 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 GPR161Q8N6U8 529 aaKnown RBP19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SYT2Q8N9I0 419 aaPredicted RBP19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 LENG9Q96B70 501 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 RANBP17Q9H2T7 1088 aaKnown RBP19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 VCPKMTQ9H867 229 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 LZTFL1Q9NQ48 299 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 FEM1BQ9UK73 627 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PNMA2Q9UL42 364 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 FAM184BQ9ULE4 1060 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SRCAPQ6ZRS2 3230 aa19.66■□□□□ 0.74
HLA-DQB1-204ENST00000399084 EIF3CLB5ME19 914 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SLURP2P0DP57 97 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CYP11B2P19099 503 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SLC12A3P55017 1021 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PPP2R3AQ06190 1150 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SF3B2Q13435 895 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 LRRC55Q6ZSA7 311 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 EIF3CQ99613 913 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PLAGL2Q9UPG8 496 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CNTNAP1P78357 1384 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 GCOM1H8Y6P7 765 aaPredicted RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 FANCGO15287 622 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TUBBP07437 444 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ASNSP08243 561 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 POLR2MP0CAP2 368 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZNF76P36508 570 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 TGFB2P61812 414 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 JAG1P78504 1218 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 RRP1BQ14684 758 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ERCC6LQ2NKX8 1250 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 KIF4BQ2VIQ3 1234 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 GPBP1Q86WP2 473 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZC3H3Q8IXZ2 948 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 RABGGTAQ92696 567 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 ZBED3Q96IU2 234 aaPredicted RBP19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 CARD6Q9BX69 1037 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 PCDHA2Q9Y5H9 948 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 COL4A3BPQ9Y5P4 624 aa19.65■□□□□ 0.74
HLA-DQB1-204ENST00000399084 POTEB2H3BUK9 544 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ATP8B1O43520 1251 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KRT86O43790 486 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KCNA3P22001 575 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CAP2P40123 477 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NAA30Q147X3 362 aaPredicted RBP19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SHROOM1Q2M3G4 852 aaPredicted RBP19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 USH1GQ495M9 461 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms