RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 ARHGAP20Q9P2F6 1191 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 JRKLQ9Y4A0 524 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
C4orf3-201ENST00000399075 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 KCNK18Q7Z418 384 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 MYOCDQ8IZQ8 938 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 RUBCNQ92622 972 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
C4orf3-201ENST00000399075 KIF11P52732 1056 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 COASYQ13057 564 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 UBE2SQ16763 222 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 BAP1Q92560 729 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 PSTPIP2Q9H939 334 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 USP40Q9NVE5 1235 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 EPHB6O15197 1021 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 PJA2O43164 708 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 TACC1O75410 805 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 IDEP14735 1019 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 FKBP3Q00688 224 aaKnown RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 CYP27A1Q02318 531 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 SYN2Q92777 582 aaPredicted RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 MBOAT7Q96N66 472 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
C4orf3-201ENST00000399075 ATAD5Q96QE3 1844 aa12.61□□□□□ -0.39
C4orf3-201ENST00000399075 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 GNA14O95837 355 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MARSP56192 900 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MOXD1Q6UVY6 613 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 FAM207AQ9NSI2 230 aaPredicted RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 GEMIN8Q9NWZ8 242 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 SNX12Q9UMY4 172 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 CYP3A7-CYP3A51PA0A087WV96 503 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 UBAP1LF5GYI3 381 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 CYP3A7P24462 503 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 USP11P51784 963 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ECM1Q16610 540 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 PLEKP08567 350 aaPredicted RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 ZC3H3Q8IXZ2 948 aaKnown RBP12.6□□□□□ -0.39
C4orf3-201ENST00000399075 NEK11Q8NG66 645 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MKL1Q969V6 931 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 DUSP10Q9Y6W6 482 aa12.6□□□□□ -0.39
C4orf3-201ENST00000399075 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 RBAK-RBAKDNI3L0D1 243 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 CAGE1Q8TC20 777 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 CEP72Q9P209 647 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 IRF6O14896 467 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
C4orf3-201ENST00000399075 RRAGAQ7L523 313 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 MMGT1Q8N4V1 131 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 PCDHA2Q9Y5H9 948 aa12.59□□□□□ -0.39
C4orf3-201ENST00000399075 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
C4orf3-201ENST00000399075 AKR1B10O60218 316 aa12.58□□□□□ -0.4
C4orf3-201ENST00000399075 MARCH6O60337 910 aa12.58□□□□□ -0.4
C4orf3-201ENST00000399075 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
C4orf3-201ENST00000399075 HSP90B2PQ58FF3 399 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms