RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 PDGFCQ9NRA1 345 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 PTCH2Q9Y6C5 1203 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 HTTP42858 3142 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 MSH4O15457 936 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 NASPP49321 788 aaPredicted RBP20.9■□□□□ 0.94
TTC3-203ENST00000399010 PRMT2P55345 433 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 TRIM32Q13049 653 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 STK38Q15208 465 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 NIPA1Q7RTP0 329 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 GPRASP2Q96D09 838 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 KATNBL1Q9H079 304 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 VTA1Q9NP79 307 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 CEP131Q9UPN4 1083 aa20.9■□□□□ 0.94
TTC3-203ENST00000399010 MARCH6O60337 910 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 SEMA3FQ13275 785 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 ORC2Q13416 577 aaPredicted RBP20.89■□□□□ 0.94
TTC3-203ENST00000399010 PTPAQ15257 358 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 MFSD14CQ5VZR4 134 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 C4orf32Q8N8J7 132 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 ABHD16BQ9H3Z7 469 aa20.89■□□□□ 0.94
TTC3-203ENST00000399010 IGHA2P01877 340 aa20.89■□□□□ 0.93
TTC3-203ENST00000399010 ACVR2BQ13705 512 aa20.89■□□□□ 0.93
TTC3-203ENST00000399010 TRMT44Q8IYL2 757 aaKnown RBP20.89■□□□□ 0.93
TTC3-203ENST00000399010 ETNPPLQ8TBG4 499 aa20.89■□□□□ 0.93
TTC3-203ENST00000399010 ZNF577Q9BSK1 485 aa20.89■□□□□ 0.93
TTC3-203ENST00000399010 BAG4O95429 457 aaKnown RBP20.88■□□□□ 0.93
TTC3-203ENST00000399010 OR52Z1P0C646 297 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 MARCKSP29966 332 aaPredicted RBP20.88■□□□□ 0.93
TTC3-203ENST00000399010 ATP2C1P98194 919 aaPredicted RBP20.88■□□□□ 0.93
TTC3-203ENST00000399010 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 HAS1Q92839 578 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 SPATA32Q96LK8 384 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 AGO4Q9HCK5 861 aaKnown RBP20.88■□□□□ 0.93
TTC3-203ENST00000399010 KCNMB3Q9NPA1 279 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 CENPFP49454 3210 aa20.88■□□□□ 0.93
TTC3-203ENST00000399010 SPATA31C2B4DYI2 1134 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 SLC39A14Q15043 492 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 TAPT1Q6NXT6 567 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 PTPN22Q9Y2R2 807 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 IPO5O00410 1097 aaKnown RBP20.87■□□□□ 0.93
TTC3-203ENST00000399010 SORBS3O60504 671 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 ATP9AO75110 1047 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 ARIH2O95376 493 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 YEATS4O95619 227 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 BMP15O95972 392 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 TXKP42681 527 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 PXYLP1Q8TE99 480 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 CDHR1Q96JP9 859 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 MTMR9Q96QG7 549 aa20.87■□□□□ 0.93
TTC3-203ENST00000399010 HMGCRP04035 888 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 ICAM3P32942 547 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 ADCYAP1R1P41586 468 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 ITGB3BPQ13352 177 aaPredicted RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 TMEM63BQ5T3F8 832 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 SCFD2Q8WU76 684 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 LEO1Q8WVC0 666 aaPredicted RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 DDX39AO00148 427 aaKnown RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 SPTLC2O15270 562 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 ZNF865P0CJ78 1059 aaPredicted RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 SP2Q02086 613 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 LY6KQ17RY6 165 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 CTU1Q7Z7A3 348 aaKnown RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 SLAIN1Q8ND83 568 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 SLC5A5Q92911 643 aa20.86■□□□□ 0.93
TTC3-203ENST00000399010 SCAND2PQ9GZW5 306 aaPredicted RBP20.86■□□□□ 0.93
TTC3-203ENST00000399010 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.85■□□□□ 0.93
TTC3-203ENST00000399010 LAD1O00515 517 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 MAFGO15525 162 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 TXNP10599 105 aaKnown RBP20.85■□□□□ 0.93
TTC3-203ENST00000399010 PRKAR2AP13861 404 aaKnown RBP20.85■□□□□ 0.93
TTC3-203ENST00000399010 UBA1P22314 1058 aaKnown RBP20.85■□□□□ 0.93
TTC3-203ENST00000399010 PTGS1P23219 599 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 GRK4P32298 578 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
TTC3-203ENST00000399010 TTLL4Q14679 1199 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 TRPV1Q8NER1 839 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 BCAS3Q9H6U6 928 aa20.85■□□□□ 0.93
TTC3-203ENST00000399010 TBX3O15119 743 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 CYBAP13498 195 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 KCNA2P16389 499 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 SLFN12Q8IYM2 578 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 FAM20AQ96MK3 541 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 DDX41Q9UJV9 622 aaKnown RBP20.84■□□□□ 0.93
TTC3-203ENST00000399010 RCOR1Q9UKL0 485 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 VWA3AA6NCI4 1184 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 IL17AQ16552 155 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 TPRNQ4KMQ1 711 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 GJC2Q5T442 439 aaPredicted RBP20.84■□□□□ 0.93
TTC3-203ENST00000399010 KCNG4Q8TDN1 519 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 SH3TC2Q8TF17 1288 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 COPS5Q92905 334 aa20.84■□□□□ 0.93
TTC3-203ENST00000399010 TTC12Q9H892 705 aaPredicted RBP20.84■□□□□ 0.93
TTC3-203ENST00000399010 RBM47A0AV96 593 aaKnown RBP20.83■□□□□ 0.93
TTC3-203ENST00000399010 GAS7O60861 476 aa20.83■□□□□ 0.93
TTC3-203ENST00000399010 INHAP05111 366 aa20.83■□□□□ 0.93
TTC3-203ENST00000399010 CNGA1P29973 690 aa20.83■□□□□ 0.93
TTC3-203ENST00000399010 TECP42680 631 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms