RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 MBOAT7Q96N66 472 aa9.82□□□□□ -0.84
GIN1-201ENST00000399004 TUBGCP2Q9BSJ2 902 aa9.82□□□□□ -0.84
GIN1-201ENST00000399004 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.82□□□□□ -0.84
GIN1-201ENST00000399004 FER1L6Q2WGJ9 1857 aa9.82□□□□□ -0.84
GIN1-201ENST00000399004 CCDC194A0A1B0GVG4 234 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 RPSAP08865 295 aaKnown RBP9.81□□□□□ -0.84
GIN1-201ENST00000399004 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
GIN1-201ENST00000399004 SETQ01105 290 aaPredicted RBP9.81□□□□□ -0.84
GIN1-201ENST00000399004 NAA35Q5VZE5 725 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 TTI2Q6NXR4 508 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 RUBCNQ92622 972 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 MED4Q9NPJ6 270 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 SCN9AQ15858 1988 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 MARCH6O60337 910 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 CYLC1P35663 651 aaPredicted RBP9.81□□□□□ -0.84
GIN1-201ENST00000399004 FKBP1AP62942 108 aaKnown RBP9.81□□□□□ -0.84
GIN1-201ENST00000399004 MRIQ9BWK5 157 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 CCDC113Q9H0I3 377 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 EPB41L5Q9HCM4 733 aa9.81□□□□□ -0.84
GIN1-201ENST00000399004 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 GFPT1Q06210 699 aaPredicted RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 NBPF9Q3BBW0 867 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 RETREG2Q8NC44 543 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 ACSBG1Q96GR2 724 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 DHTKD1Q96HY7 919 aaPredicted RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.8□□□□□ -0.842e-6■■■■■ 113
GIN1-201ENST00000399004 TFCP2L1Q9NZI6 479 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 CAPN11Q9UMQ6 739 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 PSMD14O00487 310 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 PSMA7O14818 248 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 CLSTN1O94985 981 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 FAM153BP0C7A2 387 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 FAM153CQ494X1 144 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 TXNRD3Q86VQ6 643 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 MB21D1Q8N884 522 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 CRYGNQ8WXF5 182 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 TBC1D31Q96DN5 1066 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 KRT12Q99456 494 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 FAM153AQ9UHL3 310 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 PRDX5P30044 214 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 EIF4A3P38919 411 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 CARSP49589 748 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 ITIH3Q06033 890 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 NNTQ13423 1086 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 PRPF4BQ13523 1007 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 DDX42Q86XP3 938 aaKnown RBP eCLIP9.8□□□□□ -0.84
GIN1-201ENST00000399004 NELFCDQ8IXH7 590 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 MMTAG2Q9BU76 263 aaKnown RBP9.8□□□□□ -0.84
GIN1-201ENST00000399004 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
GIN1-201ENST00000399004 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 EPHB6O15197 1021 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 SRGNP10124 158 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 MAP2K2P36507 400 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 TECP42680 631 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 EIF6P56537 245 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 TMEM119Q4V9L6 283 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 CEP85LQ5SZL2 805 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 WDR59Q6PJI9 974 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 ERGIC2Q96RQ1 377 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 TMEM60Q9H2L4 133 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 RBM12Q9NTZ6 932 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 EXOC1Q9NV70 894 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 PSD3Q9NYI0 1048 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 GGT7Q9UJ14 662 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 HYOU1Q9Y4L1 999 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 TLDC2A0PJX2 215 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 AGPSO00116 658 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 TACC1O75410 805 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 CKAP4Q07065 602 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 WDR93Q6P2C0 686 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 POTEDQ86YR6 584 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 SAP30BPQ9UHR5 308 aaKnown RBP9.79□□□□□ -0.84
GIN1-201ENST00000399004 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 PAPPA2Q9BXP8 1791 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 UTRNP46939 3433 aa9.79□□□□□ -0.84
GIN1-201ENST00000399004 CDC25CP30307 473 aa9.78□□□□□ -0.84
GIN1-201ENST00000399004 TXKP42681 527 aa9.78□□□□□ -0.84
GIN1-201ENST00000399004 KRT83P78385 493 aa9.78□□□□□ -0.84
GIN1-201ENST00000399004 SLC20A2Q08357 652 aa9.78□□□□□ -0.84
GIN1-201ENST00000399004 MIIPQ5JXC2 388 aa9.78□□□□□ -0.84
GIN1-201ENST00000399004 PAPD7Q5XG87 772 aaKnown RBP9.78□□□□□ -0.84
GIN1-201ENST00000399004 DTHD1Q6ZMT9 781 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms