RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 POTEB3A0JP26 581 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 POTEFA5A3E0 1075 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 POTECB2RU33 542 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 RPS6P62753 249 aaKnown RBP14.67□□□□□ -0.06
TOP3B-202ENST00000398793 POTEBQ6S5H4 581 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 POTEGQ6S5H5 508 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 POTEEQ6S8J3 1075 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 TPH2Q8IWU9 490 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 LZTS2Q9BRK4 669 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 SRPRBQ9Y5M8 271 aaKnown RBP14.67□□□□□ -0.06
TOP3B-202ENST00000398793 ELP1O95163 1332 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 KIAA1551Q9HCM1 1747 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 MAGEA9P43362 315 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 PABPC4Q13310 644 aaKnown RBP eCLIP14.67□□□□□ -0.06
TOP3B-202ENST00000398793 KCNK18Q7Z418 384 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 CABP7Q86V35 215 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 MTA3Q9BTC8 594 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.068e-7■■■■■ 107.1
TOP3B-202ENST00000398793 DONSONQ9NYP3 566 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 SUFUQ9UMX1 484 aa14.67□□□□□ -0.06
TOP3B-202ENST00000398793 KRT18P05783 430 aaKnown RBP14.66□□□□□ -0.06
TOP3B-202ENST00000398793 POSTNQ15063 836 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 RESP18Q5W5W9 173 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
TOP3B-202ENST00000398793 RNF146Q9NTX7 359 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 PGAP2Q9UHJ9 254 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 KIAA1024Q9UPX6 916 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
TOP3B-202ENST00000398793 POLR2MP0CAP2 368 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ARP10275 920 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
TOP3B-202ENST00000398793 CCT6AP40227 531 aaKnown RBP14.66□□□□□ -0.06
TOP3B-202ENST00000398793 MAP3K9P80192 1104 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 LRRC8AQ8IWT6 810 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ANKRD35Q8N283 1001 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 MYH6P13533 1939 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ATRNL1Q5VV63 1379 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ANKRD65E5RJM6 399 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ASIC1P78348 528 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 ECM1Q16610 540 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 LEKR1Q6ZMV7 388 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 SEPT14Q6ZU15 432 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 GLIS3Q8NEA6 775 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 TCEAL9Q9UHQ7 104 aa14.66□□□□□ -0.06
TOP3B-202ENST00000398793 EDIL3O43854 480 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 ZRANB2O95218 330 aaKnown RBP eCLIP14.65□□□□□ -0.06
TOP3B-202ENST00000398793 SMC1AQ14683 1233 aaKnown RBP14.65□□□□□ -0.06
TOP3B-202ENST00000398793 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
TOP3B-202ENST00000398793 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 MKL1Q969V6 931 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 SLC39A2Q9NP94 309 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 SNCAIPQ9Y6H5 919 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 TXLNAP40222 546 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 PSMC6P62333 389 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.06
TOP3B-202ENST00000398793 SATB1Q01826 763 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.65□□□□□ -0.06
TOP3B-202ENST00000398793 UBXN4Q92575 508 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 RIC8AQ9NPQ8 531 aa14.65□□□□□ -0.06
TOP3B-202ENST00000398793 TRIM49BA6NDI0 452 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 EGFL6Q8IUX8 553 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 NELFCDQ8IXH7 590 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 RMDN3Q96TC7 470 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 ZBED4O75132 1171 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 TMEM132BQ14DG7 1078 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 GJC2Q5T442 439 aaPredicted RBP14.64□□□□□ -0.07
TOP3B-202ENST00000398793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.64□□□□□ -0.07
TOP3B-202ENST00000398793 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 FCER1AP12319 257 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 BMP6P22004 513 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 ACTN2P35609 894 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 KSR1Q8IVT5 923 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 REXO1L1PQ8IX06 675 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 MTMR14Q8NCE2 650 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 PAGE5Q96GU1 130 aa14.64□□□□□ -0.07
TOP3B-202ENST00000398793 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
TOP3B-202ENST00000398793 PPP6R2O75170 966 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
TOP3B-202ENST00000398793 RCAN1P53805 252 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 HUNKP57058 714 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 ARHGEF16Q5VV41 709 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 PPP1R16BQ96T49 567 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
TOP3B-202ENST00000398793 MTRQ99707 1265 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 USP20Q9Y2K6 914 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 Q3C1V9 767 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 CCAR2Q8N163 923 aaKnown RBP14.63□□□□□ -0.07
TOP3B-202ENST00000398793 ADAM21Q9UKJ8 722 aa14.63□□□□□ -0.07
TOP3B-202ENST00000398793 ABT1Q9ULW3 272 aaKnown RBP14.63□□□□□ -0.07
TOP3B-202ENST00000398793 VWA5AO00534 786 aa14.62□□□□□ -0.07
TOP3B-202ENST00000398793 GMCL1P1Q8NEA9 526 aa14.62□□□□□ -0.07
TOP3B-202ENST00000398793 SAMSN1Q9NSI8 373 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms