RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 SF3A1Q15459 793 aaKnown RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 INF2Q27J81 1249 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 NOM1Q5C9Z4 860 aaKnown RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 ARHGEF16Q5VV41 709 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 C17orf99Q6UX52 265 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 CTU1Q7Z7A3 348 aaKnown RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 SHCBP1Q8NEM2 672 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 ZNF296Q8WUU4 475 aaPredicted RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 TNFRSF25Q93038 417 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 TATDN2Q93075 761 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 LRCH3Q96II8 777 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 MMP19Q99542 508 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 EFCC1Q9HA90 598 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
LINC00887-201ENST00000397644 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 IVNS1ABPQ9Y6Y0 642 aa8.67□□□□□ -1.02
LINC00887-201ENST00000397644 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 B4DLN1 442 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 GOLGA6L22H0YM25 854 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 MYCLP12524 364 aaPredicted RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 MAPK4P31152 587 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 TRAPPC10P48553 1259 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 TOB1P50616 345 aaPredicted RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 SOX10P56693 466 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CRHR2Q13324 411 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 STK38Q15208 465 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 FAM110CQ1W6H9 321 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 TTC38Q5R3I4 469 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 NEK8Q86SG6 692 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 NSUN6Q8TEA1 469 aaKnown RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CHAMP1Q96JM3 812 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 RMDN3Q96TC7 470 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 NAP1L4Q99733 375 aaKnown RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 ANO3Q9BYT9 981 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 SCAND2PQ9GZW5 306 aaPredicted RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 PORCNQ9H237 461 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 A1CFQ9NQ94 594 aaKnown RBP8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CYP39A1Q9NYL5 469 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CNPY2Q9Y2B0 182 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 PCDHB6Q9Y5E3 794 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 CLIC4Q9Y696 253 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 PDE4DIPQ5VU43 2346 aa8.66□□□□□ -1.02
LINC00887-201ENST00000397644 PFASO15067 1338 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 GOLGA6L4A6NEF3 574 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 GPR25O00155 361 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 PRPF40AO75400 957 aaKnown RBP8.65□□□□□ -1.02
LINC00887-201ENST00000397644 BCRP11274 1271 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 MCM7P33993 719 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 UBXN2AP68543 259 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 ARHGAP4P98171 946 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 PLEKHH3Q7Z736 793 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 DPP9Q86TI2 863 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 PURBQ96QR8 312 aaKnown RBP8.65□□□□□ -1.02
LINC00887-201ENST00000397644 USP28Q96RU2 1077 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 R3HDMLQ9H3Y0 253 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 GDPD2Q9HCC8 539 aa8.65□□□□□ -1.02
LINC00887-201ENST00000397644 ADD3Q9UEY8 706 aaKnown RBP8.65□□□□□ -1.02
LINC00887-201ENST00000397644 TSR3Q9UJK0 312 aaKnown RBP8.65□□□□□ -1.02
LINC00887-201ENST00000397644 ALPK3Q96L96 1907 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 SPTLC2O15270 562 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
LINC00887-201ENST00000397644 FIBPO43427 364 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 FKTNO75072 461 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 BMP15O95972 392 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 PGK2P07205 417 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 NR3C2P08235 984 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 CYP3A4P08684 503 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 EIF2AK2P19525 551 aaKnown RBP8.64□□□□□ -1.03
LINC00887-201ENST00000397644 MCM4P33991 863 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 CNTN2Q02246 1040 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 GHRHRQ02643 423 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 KIF22Q14807 665 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 NUDT18Q6ZVK8 323 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 GPR142Q7Z601 462 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 DNERQ8NFT8 737 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 IWS1Q96ST2 819 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 MPHOSPH6Q99547 160 aaKnown RBP8.64□□□□□ -1.03
LINC00887-201ENST00000397644 PXMP2Q9NR77 195 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
LINC00887-201ENST00000397644 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
LINC00887-201ENST00000397644 HTTP42858 3142 aa8.63□□□□□ -1.03
LINC00887-201ENST00000397644 A0A0G2JMZ2 1700 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms