RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 COASYQ13057 564 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 CTTNQ14247 550 aaKnown RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 ERMNQ8TAM6 284 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 PNMA5Q96PV4 448 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 ALS2CR12Q96Q35 445 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 CRAMP1Q96RY5 1269 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 CUEDC2Q9H467 287 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 EHD2Q9NZN4 543 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 EPHB6O15197 1021 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PRPHP41219 470 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 MMS19Q96T76 1030 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 LRRC27Q9C0I9 530 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 BHMT2Q9H2M3 363 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 BLOC1S4Q9NUP1 217 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 CAPN11Q9UMQ6 739 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PDS5AQ29RF7 1337 aaKnown RBP11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 SORBS3O60504 671 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 SASH3O75995 380 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PAFAH1B1P43034 410 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 ECM1Q16610 540 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 IFT81Q8WYA0 676 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 C7orf25Q9BPX7 421 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 SRGNP10124 158 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 NR2F2P24468 414 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PBX1P40424 430 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 KIF11P52732 1056 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 RUFY1Q96T51 708 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 RIOX1Q9H6W3 641 aa11.55□□□□□ -0.56
CPSF1P1-201ENST00000397477 PAPPAQ13219 1627 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 CETN3O15182 167 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 GABPB1Q06547 395 aaPredicted RBP11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 MAN2A1Q16706 1144 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 HDXQ7Z353 690 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 MYCT1Q8N699 235 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 FAM13AO94988 1023 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 FTCDO95954 541 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 HERVK_113P62684 666 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 KCND1Q9NSA2 647 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 ADAMTS1Q9UHI8 967 aa11.54□□□□□ -0.56
CPSF1P1-201ENST00000397477 FKBP3Q00688 224 aaKnown RBP11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 KLHL30Q0D2K2 578 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 TAF3Q5VWG9 929 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 KSR1Q8IVT5 923 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 TBC1D5Q92609 795 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 FGFBP2Q9BYJ0 223 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 C4AP0C0L4 1744 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 C4BP0C0L5 1744 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 NDUFB10O96000 172 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 BMP3P12645 472 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 ACTN1P12814 892 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 ARHGAP25P42331 645 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 ECE1P42892 770 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 CYP2J2P51589 502 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 PSMC6P62333 389 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 WHAMMP3Q1A5X7 153 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 NFRKBQ6P4R8 1299 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 GBP3Q9H0R5 595 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 PCDHA13Q9Y5I0 950 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 COL4A3BPQ9Y5P4 624 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 MYL1P05976 194 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 WDR59Q6PJI9 974 aa11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 REXO2Q9Y3B8 237 aaKnown RBP11.53□□□□□ -0.56
CPSF1P1-201ENST00000397477 CCDC66A2RUB6 948 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 POTEB2H3BUK9 544 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 SLC9C1Q4G0N8 1177 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 FAM83BQ5T0W9 1011 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 SFR1Q86XK3 245 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms